Salmo salar (Atlantic salmon): 100196575
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Entry
100196575 CDS
T04363
Symbol
tnfsf13, tnf13
Name
(RefSeq) tumor necrosis factor (ligand) superfamily, member 13
KO
K05475
tumor necrosis factor ligand superfamily member 13
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100196575 (tnfsf13)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100196575 (tnfsf13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196575 (tnfsf13)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sasa04052
]
100196575 (tnfsf13)
04090 CD molecules [BR:
sasa04090
]
100196575 (tnfsf13)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100196575 (tnfsf13)
Cytokines and neuropeptides [BR:
sasa04052
]
Cytokines
Tumor necrosis fators
100196575 (tnfsf13)
CD molecules [BR:
sasa04090
]
Proteins
100196575 (tnfsf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Flu_C_NS1
Motif
Other DBs
NCBI-GeneID:
100196575
NCBI-ProteinID:
NP_001135076
UniProt:
B5XH00
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All DBs
Position
ssa11:complement(77330247..77334072)
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AA seq
235 aa
AA seq
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MTNRYTVHFHGSYLLYAVSLFLACLMVLQSNRVREMQVELRELRQWTSLVCGDIKESSTD
ISRCGISDSHRHTQWNGIRGKREISRHGRRRQRRTVGRSAFLHLVPLSSHSYDEDDYTLV
EWAQGLSRLGEGLQVFGEKVTVVTEGTYFIYSQVLYKDTTWTMGHVIKKRLHGIETILMK
CIQSMPSNITVAQNTCYTAGVHYLEPGSTLELSIPRKSAGLVLKPHSTFLGMFRI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccgttatacagtacattttcatggctcatatctgctgtacgctgtgtcgctg
ttcttggcctgcttgatggtcctgcagtccaaccgggtcagagagatgcaggtcgaactg
cgggagctgcgtcagtggaccagtctggtgtgcggggacataaaggaatcatctactgat
atctcgcgctgcgggatatctgactctcacagacatacacaatggaatggaattcgagga
aagagggagatttcaagacatgggagacggagacagcggcgcactgtagggaggagtgcc
tttcttcaccttgttcctctgtcatcacactcatatgatgaagatgactacactctggta
gaatgggctcaaggactgagtcgtctaggggaggggctgcaggtctttggagaaaaagtc
accgtggtaaccgaagggacttacttcatctacagtcaggtgctgtataaagacaccaca
tggactatgggtcatgtgatcaagaagcgtctacatggtattgagaccatcttgatgaag
tgcatacagagcatgcccagcaacatcactgtggcccaaaacacctgctacacagccggt
gtccattacctggagccaggatccactctggaactctccattcccaggaaatctgctggg
cttgtcctaaagcctcactccaccttccttggcatgttcaggatttga
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