Salmo salar (Atlantic salmon): 100196638
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Entry
100196638 CDS
T04363
Symbol
hoxc6ba
Name
(RefSeq) homeobox protein HoxC6ba
KO
K09306
homeobox protein HoxA/B/C6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100196638 (hoxc6ba)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100196638 (hoxc6ba)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100196638
NCBI-ProteinID:
NP_001135139
UniProt:
B3SU92
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Position
ssa12:complement(54171068..54181647)
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AA seq
232 aa
AA seq
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MNSYFANPSLSCHLAGGQEVLPNVALNSATYDAVRHYSSYGAAVAQNRIYSSPFYSPQDN
VVFGSSRGPYEYGSNVFYQDKDVLPSCRQSSLGQGAQTSLPQDYPSDQGRNGSQEQKGNI
QIFPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL
TERQIKIWFQNRRMKWKKESNLTSTLTESVSAGVSQDTGKEDTEEATEEKKE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtatttcgcaaacccgtcgctctcatgccatttagctggtggtcaagaggtt
ttacctaacgtggccctaaactcagctacctatgacgctgttcgacactactcatcctac
ggagccgctgtggcccaaaatcggatatattcctctcctttctattcgccccaagacaac
gtggtgttcggctcgagcaggggaccgtacgagtatggatccaacgtgttttaccaagat
aaggacgtgctgcccagctgtaggcagagcagtttgggacaaggtgcacaaacctcactc
ccccaggattacccgtctgatcagggcaggaacggctcgcaggaacagaaggggaacatt
cagatcttcccgtggatgcagcggatgaactctcatagcggagttggatacggttctgac
agacgaagaggccgccaaatttactcccggtaccaaactctagaactcgaaaaggaattc
catttcaaccgctacttgacgagacgcagacgtatcgaaatcgccaatgcactctgtctc
accgaacgtcagataaaaatctggttccagaatcgccggatgaaatggaaaaaggaaagc
aatctaacttcgactctcaccgaaagtgtttcggcaggggtgagtcaagacacgggtaaa
gaggacacagaagaggcgacagaagagaagaaagaatga
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