Salmo salar (Atlantic salmon): 100196641
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Entry
100196641 CDS
T04363
Symbol
hoxd3ab
Name
(RefSeq) homeobox protein HoxD3ab
KO
K09303
homeobox protein HoxA/B/D3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100196641 (hoxd3ab)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100196641 (hoxd3ab)
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
100196641
NCBI-ProteinID:
NP_001135142
UniProt:
B3SUB7
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Position
ssa21:complement(51171250..51173096)
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AA seq
399 aa
AA seq
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MQKATFYDHSGVFGSYSYPKSESYSYGPSHQPYSTSNLESDYQGPVCPIQTPTVRPPTHK
DNTMNGNCTRSSSSQGNSQPPSIGEQPQAPPSSASSPNSSNTSSQKKKSPSNNDSNTANP
VTNKQIFPWMKETRSNAKHKSNSSNNNNCSTAEGESCDEKSPPGPASKRVRTAYTSAQLV
ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPIGHSP
DRSPPLSGPNHIGYSVNVNCLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPV
SEYEHHSMQGNGGFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAA
QIPGNHHHGPCDPHPTYTDLTSHHASQGRIQEAPKLTHL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagctactttctacgatcattctggagtctttggaagctactcttaccccaaa
tccgagtcatatagttatggccccagtcaccagccctactccacttctaaccttgagagt
gattatcagggtccagtttgtccaatacaaaccccaactgtacggccaccaactcataaa
gacaataccatgaatggcaactgcacgagatccagtagcagccaaggaaacagccaaccg
ccgagtattggtgaacagccgcaagcacctccatcgtcggcctcatcgcctaactccagc
aacacttcatctcagaagaagaaatctccctcaaacaatgattctaatactgccaaccca
gtcactaacaaacaaatattcccatggatgaaggagacgagatcgaacgccaaacacaaa
agcaacagcagcaacaacaacaattgctcaaccgcagaaggtgagtcctgcgatgaaaaa
agcccacctggtccagcctccaaacgggtccgaactgcctacaccagtgcacaacttgta
gaacttgagaaggagttccatttcaaccggtacctgtgtcgtccccgaagagtggagatg
gctaatttattgaacctcactgagcgccaaataaagatctggtttcaaaacagaaggatg
aaatacaaaaaggatcagaaggccaaggggataatgcactctcccatcggacactcccca
gacagaagcccaccattaagtggcccaaatcacatcggatattctgtcaatgtaaactgt
ctcagctatgacgcgccgtcgcccccttcattcgccaaaccccagcaaaacatgtacggc
ttggcagcttacacggcaccattaggtggctgtataccgcaacagaaaaggtatccggtc
tccgaatacgagcaccacagcatgcaaggcaatggtggctttgccaacgctaatttgcaa
ggtagtccggtgtacgttgggggaaatttcgttgattccatgccagcctcgggtcccatg
ttcaacctcggccatctcccccatccctcatccgccagcgtggactacagctgtgccgct
cagattccaggcaaccaccaccatggaccctgtgacccccatcccacatatacagacctc
acctctcaccatgcgtctcagggaaggattcaggaagcgcctaaattaacgcatttgtaa
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