KEGG   Salmo salar (Atlantic salmon): 100196667
Entry
100196667         CDS       T04363                                 
Symbol
rbm8a, rbm8
Name
(RefSeq) RNA binding motif protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100196667 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100196667 (rbm8a)
   03015 mRNA surveillance pathway
    100196667 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100196667 (rbm8a)
   03041 Spliceosome [BR:sasa03041]
    100196667 (rbm8a)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100196667 (rbm8a)
Spliceosome [BR:sasa03041]
 Complex C
  Other components
   EJC/TREX
    100196667 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 100196667
NCBI-ProteinID: NP_001135168
UniProt: B5DGI7 A0A1S2X365
LinkDB
Position
ssa05:55904906..55908682
AA seq 175 aa
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggctgacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgataccgtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcagagtttggagagatcaag
aacctacacctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacgtacaaagaggcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcccatcagtgtggactggggctttgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga

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