Salmo salar (Atlantic salmon): 100196696
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Entry
100196696 CDS
T04363
Symbol
sox2
Name
(RefSeq) SRY-box containing gene 2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100196696 (sox2)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100196696 (sox2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100196696
NCBI-ProteinID:
NP_001135190
UniProt:
B5X176
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Position
ssa10:24039267..24041239
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AA seq
315 aa
AA seq
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MYNMMETELKPPAPQTNSGGTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNNAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccccccgcaccccagacaaattctgggggt
actgggaattcaaattcatctggaaacaaccagaaaaacagtccggaccgagtcaaaaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
ccaaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatct
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagacgctgatgaagaaggac
aagtacactctgccaggtgggcttcttgcaccgggcggcaatggcatgggcgcgggagtg
ggtgtagggggaggcttgggcggcggggttaatcaaaggatggacagttacgcacatatg
aacggctggacaaatggaggttatggcatgatgcaggagcagcttggctacgggcagcac
cctggtttaaacgctcacaacaacgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgactaactcccagacctacatgaacggatcacccacgtat
agcatgtcctactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttccagtccccccgtagtcacgtcgtcgtctcactccaggggt
gctccatgtcagacaggagacctacgggacatgatcagtatgtacttaccgggcgctgag
gtgccggagcaaactgctcaaagcagactccacatgtcccaacattaccagagcgcacct
gtacccggcacgacgattaatggcacactcccattatcacatatgtaa
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