Salmo salar (Atlantic salmon): 100196732
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Entry
100196732 CDS
T04363
Symbol
sbno1
Name
(RefSeq) strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
100196732 (sbno1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100196732 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
100196732
NCBI-ProteinID:
XP_013982860
UniProt:
A0A1S3KVY2
LinkDB
All DBs
Position
ssa01:complement(114850208..114879427)
Genome browser
AA seq
1410 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGMEAMAPPTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHTAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTNIILVSTKMIHKPAELNNGIKKEVSSKDVARFWVNDDMKVRSFSPTLKLPGMKE
EEEAEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEET
VDRGWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRK
RSLWFSVSNDLKYDAERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSL
IGESQSGGKYKTRFKQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQN
KLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMD
MKLRGMYIARQLSFTGVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQR
MKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALE
EGGGELNDFVSTAKGVLQSLIEKHFPAPDRQKLFSLLGIDLSAKKTPSPSEAAAEQKGKK
RKAGAEIKKPEKRKRKSGGLSGSSSDDSESEESDKDDAESDDSFKSVSSGEDDDDFNPFK
DDSSEDEEDDPWLSGKRKEVKKGKEKMNKKKKKKKSIDPDSIHSALLASGLGSIRPAFTT
PIVKTSSTPAIAKVEADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDEL
GGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEA
ASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAG
EQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLV
NPPSDFEGDFYKEIRHGLIGVGLINVEDQSGILSLDKDYNNIGKFLNRILGMAVQEQNAL
FQYFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKMEAKKFLTPGYSTSGHVELYTVS
VERGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLK
LEAYADIKKKCKKVLSDDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRT
YYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILS
SSDQSQQLAVQQQQKWQQLHPQSLSHVHNT
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgtttgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctgggtgttggctcagggatggaggcaatggctccacccacacct
gcagtctcaatcaggcacaagcctcagccctcaaccaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacggcc
agacacaccatcacagtcactaaggtggtccatacagctccgtcagccctgcggggatca
tcttccacacttacctactccactgctctcccctcccctgtctccacagtggttccttcc
aacagagagcagattcagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccgccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccaatattatactggtctcgacaaagatgatccacaaaccagcg
gaactgaacaacgggataaagaaggaggtgtcaagtaaagatgtcgctcggttctgggtg
aacgacgacatgaaagtgcggagcttctcacctacactaaaactcccaggaatgaaggag
gaggaggaggctgaggaagaggaggatgaagagttgggtcatgctgagacatacgctgag
tacatgcccatgaaattgcggattgggctgcgtcacccagacccagtggtggagaccagc
tccctgtccagtgtgaagcctccaaacgtttggtacagaatgtccataccagaggagact
gtcgaccgcggctggctgtctgccctgcagctggaggccatcacatacgctgcccagcaa
catgagacattcctccctaacggcgaccgagcgtcctatctgataggagacggggccgga
gtgggcaagggccggaccatcgctgggatcatctacgagaactacctcctcggcagaaag
aggtcactctggttcagtgtttctaatgacctgaagtatgatgcggagagggatctgaaa
gacataggagccaagaacattcaggtccattcactaaacaagtttaagtatggtaagatc
tcgtccaaacacaatggcagtgtgaagaagggggtgatcttcgctacgtactcctctctg
atcggagagagccagtctggagggaagtacaagacccgcttcaaacagctgctccactgg
tgtggagaggactttgacggagtcattgtgtatgacgagtgtcacaaagccaaaaatgtc
tgtcccatcgggtcatccaaacccaccaagacgggactggcggtcctggagctgcagaac
aaactgcccaaggcacgggtggtgtacgctagcgccactggtgcgtctgagccccgtaac
atggcctacatgaaccgtctgggaatctggggagaggggacacctttcagagagttcagc
aactttatccaggctgtggaacgcagaggtgttggtgccatggagatagttgccatggat
atgaagctgagggggatgtacattgccaggcagctgagcttcacaggcgtcacgttcaag
attgaggaggttcccttgacaacccactacatcaagatgtacaacaagtctgtacgcctg
tgggtggctgcgcgggagaagttccaggcggctgctaacctgatggaggcagagcagcgg
atgaagaagtccatgtggggtcagttctggtcggcccaccagaggttcttcaagtacctc
tgcatcgcctccaaggtccgcagggtggtgcagcttgccagggaggaggtcaaaaacgga
aagtgtgtcgtgattggtcttcagtcgacaggagaggccagaacactggaggccctggag
gaaggaggaggagagctgaacgactttgtttccaccgcaaaaggtgttctgcagtccttg
atagagaagcacttccctgctccagacagacaaaagctgttcagtctgctgggcatcgac
ctgtcggccaagaagacgccatcgcccagcgaggccgccgcagagcaaaagggcaagaag
aggaaagcaggtgctgagataaagaaacctgagaagcggaagagaaagtctggtggtctg
tcggggagtagctctgacgacagcgaatcggaggagtctgataaggatgatgcggagagt
gacgacagcttcaagtcggtcagctctggagaagatgatgatgacttcaaccccttcaag
gatgattccagtgaggatgaggaggatgacccctggctgtctggaaagaggaaagaggtg
aagaaaggcaaggagaagatgaataaaaagaagaaaaagaagaagagcattgacccagac
tctatccacagtgccttgttagcctctggtctgggctccatcaggcctgctttcaccacc
cccatagtcaagacctccagcacacctgccatagccaaggtagaggcagatgacagctgt
atgaccagtcaggatgctgtggaagatgctcagcagatgaagagagatctgttggaccag
ctggaaaagctggctcaggatctaccccccaacactctggatgaactcatagacgagctg
ggaggaccggacaatgtggctgagatgacgggccgtaaaggtcgggtggtcagtaacgac
gacggcagcatctcttacgagtcccgctctgaattggatgttcctgtggagatcctcaac
ctcacagagaaacagaggttcatggacggagagaaaaacatagccatcatctcggaggca
gctagctccggtatctccctgcaggctgaccggcgggtgaagaaccagaggaggagggtc
cacatgaccctggagctgccctggagcgcagacagagccatacagcagtttgggaggacc
cacaggtctaaccaggtgacggctccagagtacgtgttcctcatctctgagctggctggg
gaacagaggtttgcctccattgtggccaagagactggagagcctgggtgccctcacgcat
ggagacagaagagcaacagagacaagagatctcagcaggttcaacttcgacaacaaatat
ggcagaaatgcactggagatcgtgatgaagtctattgtcaacctggactctccgttagtg
aatcctccttcggacttcgaaggggatttctacaaagagatccgtcatgggttgattgga
gtgggtctgatcaatgtggaggaccaatcagggattctgtctctggacaaagactacaac
aacatagggaagttcctgaaccgtatcctagggatggcagtgcaggagcagaacgctctg
ttccagtacttctctgacactctggcagctgtcatacagaacgccaagaagaacggacgc
tacgacatgggcatcctggacctgggttctggggatgagaaggtaaagaagatggaagcc
aagaagttcctgaccccaggctactccacctcaggacatgtggagctctacacggtgagt
gtggagagaggcatgtcctgggaggatgccacccacgcctgggccgagcagagtggacca
gacgatggcttctatgtacagataaggaacaacaagaagacggccatcttggtgcaggag
gtgaacagcaagaagaggctgttcctggtctatagacctaacacgggaaaacagcttaaa
ctggaagcctacgctgacatcaagaagaagtgtaaaaaggtgttgtcagatgatgccaaa
cagcactggatcgaccagtacaagtcttcagctgagatctgcgctcatgcttactggcgt
ggtaactgtaagaaggcgtcagtgggtctgcagtgtgaggtgggtctgcgctgcaggacg
tactatgtgctgtgtggctctgtgctcagcgtgtggaccaaggtggagggggtcctggcc
tctgtcagcggaaccaatgtcaagatgcaaatcgtccgcctcaggacagaggacgggcag
aggatcgtgggcctgatcattccagcgaactgcgtctctcctctgaccaacatcctgtcg
tcatctgaccagtcacagcaactggctgttcagcagcagcagaagtggcagcagctgcac
cctcagagcctcagccatgtacacaacacatag
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