Salmo salar (Atlantic salmon): 100196735
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Entry
100196735 CDS
T04363
Symbol
dc1i2
Name
(RefSeq) Cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100196735 (dc1i2)
09142 Cell motility
04814 Motor proteins
100196735 (dc1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100196735 (dc1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
100196735 (dc1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
100196735 (dc1i2)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
100196735 (dc1i2)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
100196735 (dc1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
100196735
NCBI-ProteinID:
NP_001135229
UniProt:
B5X2R1
LinkDB
All DBs
Position
ssa21:16461952..16488542
Genome browser
AA seq
613 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTSKSAGTPSEAGSQDSGDGAVGSRRGPLKLGMAKITHVD
FPPKETVSYTKETQTPVTTQQKEEEDDDEEEEEEEIAPPQPVLEIQMEKPDQKEEEEAPP
QELTEEDKLQILHSSEFITFFDHSTRIVERALSEHVDVFFDYSGREMEEKEGEIQAGAKL
FLNRQFVDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKNTP
EYVFHCQSAVMSAAFARFHPNLVVGGTYSGQLVLWDNRSNKRTPVQRTPLSAAAHTHPVY
CVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMSFPLGDVN
NFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGPVDFSHLFVTSSFDWT
VKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTAST
TVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQISVSRNDEWTRFVRTLAEINENR
DDAEELAAQRLSA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctaaaagcggagcttgaacggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactcggatttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacatcagctgatgtccctgttgtccctcctcccatgtct
ccgacctccaaatctgcgggcactccaagcgaggcagggagccaagactcgggcgacggc
gccgtgggatccaggcgtggacctctgaagctgggcatggccaagatcacccatgttgac
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgaccacccag
cagaaagaagaggaagacgacgacgaggaggaggaggaggaggagattgctccaccacag
ccagtgcttgagatccaaatggagaaaccagaccagaaagaggaggaggaagcacctcca
caagagctgactgaggaggacaagctgcagatcctgcactcctcagagttcataaccttc
tttgaccacagcacccgcatcgtggagcgggccctgtccgaacatgtggacgtcttcttc
gactacagtggccgggagatggaggagaaggaaggtgagatccaagctggggccaagctg
tttctgaacagacagtttgtggatgagcgctggtctaagcatcgcgtggtcacctgtctg
gactggtcccctcagtatcctgagctgctggttgcctcatacaacaacaacgaggaagcc
ccccacgagccggacggggtggccctggtctggaacatgaagtacaagaagaacactccg
gagtacgtcttccactgccagtctgcagtgatgtcggccgcctttgccaggttccaccct
aacctagtggtggggggcacctactcagggcagctcgttctgtgggacaacaggagcaac
aagaggacccccgtgcagaggacccccctgtcagcagcagcacacacgcacccagtgtac
tgtgtgaacgtggtgggcacccagaacgcccacaacctcattagcatctctaccgatggc
aagatgtgttcctggagcctggacatgctgtctcaaccgcaggacagcctggagctggtg
ttcaagcagtcgaaggccgtcgctgtcacctccatgtctttccccctcggagatgtcaac
aactttgcggtggggagcgaggacgggtccgtctacatggcgtgtcgtcatggaagtaaa
gcggggatcagtgagatgtttgagggccaccacgggcctatcacagggatagactgtcac
acagcgaccgggcccgttgacttctcccacctgtttgtcacctcctcctttgactggacc
gtcaagctgtggagcaccaagaacaacaagccactgtactcgttcgaggacaactcggac
tacgtctatgacgtcatgtggtcccccactcacccggctctgtttgcgtgtgtggatgga
gtgggccatcttgacctgtggaacctcaacaacgacactgaggttcctacggccagtacc
acagtggaggggaacccagccctgaaccgcgtgcgctgggcccactctggcaaagagata
gccgtgggagactctgatggacagatcctggtctatgatgttggagagcaaatctctgtt
tcacgcaacgacgagtggacccgttttgtccgaaccctggcggagatcaacgagaaccgc
gatgacgccgaggagcttgccgctcagcgcctctctgcctga
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integrated database retrieval system
