Salmo salar (Atlantic salmon): 100196738
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Entry
100196738 CDS
T04363
Symbol
tn13b
Name
(RefSeq) Tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100196738 (tn13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100196738 (tn13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sasa04052
]
100196738 (tn13b)
04090 CD molecules [BR:
sasa04090
]
100196738 (tn13b)
Cytokines and neuropeptides [BR:
sasa04052
]
Cytokines
Tumor necrosis fators
100196738 (tn13b)
CD molecules [BR:
sasa04090
]
Proteins
100196738 (tn13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
BclA_C
Motif
Other DBs
NCBI-GeneID:
100196738
NCBI-ProteinID:
NP_001135232
UniProt:
B5X2V2
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Position
ssa21:complement(27563602..27569195)
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AA seq
265 aa
AA seq
DB search
MASAGPNPEGGGPASGQESGGRRLSWLVLLLTLAAVTSSLSALSLYHLLALRAEVEELRS
EVFRRREEQQEARHGETLQQMSSRARRSSPDPPHPPDPQPGLSFVRKRSVGTGTENSVSQ
PCLQMLADSNRKTFQKEFALEPYTGIPWQAGLRRGSALEAESDSIVVREEGYYFVYSQVY
YMDTTFAMGHVVIRKKRNVVGDEAQHVTLFRCIQNMNPVYPYNTCYTGGIVKLEVGDSVE
LLIPRSTAKVSLDGDSTFLGAVRLA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaggtccaaatcccgagggtggtggacctgcttctgggcaggagtctggg
ggtcggaggctgtcctggctggtactgctgctgactctggcagcggtcacctcgtctctc
tctgctctgtctctgtaccacctgctggcccttagggccgaggttgaggagctccggtca
gaggtcttccgcaggagagaggagcaacaagaggctaggcatggagagacactgcagcag
atgagcagcagagccagaaggagcagcccagaccctccacacccccctgacccccagcct
gggctgtctttcgtcaggaagaggagtgtgggcacaggaactgagaactcagtgtctcag
ccttgtctacagatgctggcagatagcaacaggaaaacattccagaaagagtttgcgttg
gagccttacacagggatcccctggcaggcgggacttagaagaggctccgccctggaggca
gagagcgacagcatcgtggtcagagaggagggatactactttgtctacagtcaggtgtac
tacatggatacgacctttgccatgggtcatgtggtgatcaggaagaagaggaacgtggtg
ggagatgaagctcagcatgtcacattgttccgctgtatccagaacatgaaccctgtctac
ccatacaacacctgttacacagggggtatagtgaagctggaggtcggggacagtgtggag
ctgttgatccctcgctctacagccaaagtttctctggatggagactccactttcctgggt
gctgtcagactggcctga
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