Salmo salar (Atlantic salmon): 100196770
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Entry
100196770 CDS
T04363
Symbol
nup62
Name
(RefSeq) Nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100196770 (nup62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196770 (nup62)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100196770 (nup62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
100196770
NCBI-ProteinID:
NP_001135264
UniProt:
B5X3Z2
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Position
ssa13:80270230..80281331
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AA seq
579 aa
AA seq
DB search
MSGGFNFGQASNTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVSAPQ
SSGLFAMPTQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPVAKLNLGTPAASQPAPTGLT
MGMATPSSGTGFGLGGGLATQTTAAPAGGGFSFGTAGGLGAPVAQTQPQTQPAAAGGLSL
GTPAAATQIMGGGFSFGAAKVQASTAPAPTVTAGGGFSFGNSTPASLSLGTQPTSLTLNS
VASTAAPTTTQVGGFAFGVKPSATPAPAATAPATHASLGSSLFAVPVSTAAPATAAIAGF
LGAAPTSAAPAATSTAGSTLGFMLKPLGAVTATTTAPVGTAAPTTTTGFSLAMKPAGAIG
IGVTAPITGVATTISTVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVNAWDR
TLVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEGSVKEQSGTIYM
QNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILNAHMD
SLQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTFRITFN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggacaagcgtccaatactggattcagctttggtgctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgccaagtgctgcagctcca
ggtggtggcttctctttcggaacccccagcactccccaggccccagtatctgccccccag
agctctgggctgtttgctatgcccacccagggtagcacaaacccaactggagggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
gttgctaaactcaatctgggtacaccagccgcctctcaacctgcaccgactgggctaact
atggggatggcgaccccctcctctgggacaggctttggacttggtgggggtctcgccaca
caaaccactgctgcccctgcaggaggggggttcagctttgggaccgcaggggggcttgga
gcccctgttgcccaaactcaaccccagacccaacctgctgcagctggtggactctcttta
ggaactcctgctgcagccacccaaattatgggaggtgggtttagttttggtgcagccaag
gtccaggccagcacagctccagcccctactgtgaccgcaggagggggcttctcatttgga
aacagcacacctgccagcctctccctggggacccagcccacaagtctgactctgaactct
gtggcctcaacagctgcaccaaccacaacccaggttggaggattcgcttttggcgtcaaa
ccttctgctactccagccccggctgcaactgccccggctacccatgcctcattgggttct
tctctttttgctgtaccagtatcaacagcagctcctgctacagcagcaattgcaggattt
ttgggcgctgcccctacctcagctgccccggctgccacctcaacagcgggaagtaccctg
ggcttcatgctcaagcccctgggagcagtcactgccacaactactgccccagttggcaca
gctgcccctaccacaaccacaggtttctcactggctatgaaacctgcgggtgccattggc
attggtgtaacggcccccatcactggcgtagccacaaccatctctactgttacagcaagt
gctcctccagtgatgtcatatatccaactagagggtctcattaacaagtggagtcttgag
ctggaggaccaggagaggcatttcttacagcaagccacccaggtcaacgcctgggaccgc
acgctggtggagaacggagaaaagatcacatcactgcacagggagatggagaaagtgaaa
ttggaccaaagaaggctggaccaggaactggacttcatcctgtcacaacagaaggagctg
gaggacctgctgtccccactggaggggtctgtcaaagaacagagtggaaccatctacatg
cagaacgcagacgaggaacgcgagaggacgtacaagcttgcagagaacgtggacgcccag
ctgaagaggatgtcccaagatctaaaggagatcattgaacacctgaatacatccagcggg
ccagctgataacagtgacccgcttcagcagatctgtaaaattctcaatgcccacatggac
tctcttcaatggattgaccagaactcggtgcttctacagagaagggtggaggatgtgtcc
aaactctgcgacaaccgacgcaaagagcaggagaagacttttcgcataacatttaattaa
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