Salmo salar (Atlantic salmon): 100196774
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Entry
100196774 CDS
T04363
Symbol
ccd49
Name
(RefSeq) Coiled-coil domain-containing protein 49
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100196774 (ccd49)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100196774 (ccd49)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
Motif
Other DBs
NCBI-GeneID:
100196774
NCBI-ProteinID:
NP_001135268
UniProt:
B5X450
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All DBs
Position
ssa12:complement(23093993..23098394)
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AA seq
428 aa
AA seq
DB search
MGGGDLNLKKSWHPQTMKNIERVWKAEQKHEAEVKKIEELQKELREERAREDITRFAQQT
GALKKKDDRLDWMYQGPGGQVSRDEYLLGRPVDKQITQQFEEPESGPSEQTGLLPGSIFN
PSTPASNLDMAAKIREDPLFDIKKREEEKKREVLTNPVKMKKIKEMLRQNLEKKDKKKKR
KKDKKEKREEKERRKEKKHKRRSLSSSSVDEDKKHRHHSKEESKETTHSHSHHRSVPAGY
GLQFPAVRLHQSSKPPKHLRHRSQERSRSRSPQRTDGNGHHSSHRTDNHSSHKSENHSSH
RTDQFKVPQFQRPKAPPSPQKDRYQRHQSSTTKCLSAEELEKKRREMMDFAKQRDEERES
NIRSYKRQDEQEKEREKEKGGKHDHNAGFIHNMKLESASTSSLEDRVKRNIHSIQRTPAS
LEKNFMRR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggtgacctcaacttgaagaagagctggcatccccagactatgaaaaacata
gagcgggtatggaaggctgaacagaagcacgaggctgaggtgaaaaagattgaggagctt
cagaaggagctgagagaggaacgagctcgagaagatataaccagattcgctcagcagact
ggggctctaaagaaaaaagatgaccggttggactggatgtaccaggggccaggtggtcag
gtgtcccgtgatgagtacttgctgggccgccccgtcgacaagcagatcacccagcagttt
gaggagccagagagcggtccatccgaacaaaccggcctcctgcctggctcaatcttcaac
ccctccacccctgcatccaacctcgacatggccgccaagatcagagaggacccgctgttt
gatatcaagaaacgggaggaggagaagaaaagggaggtcttgacaaacccagtgaaaatg
aagaagatcaaagaaatgctgcgtcagaatcttgaaaagaaagacaagaaaaagaagagg
aagaaggacaagaaggagaaaagggaggagaaagagaggagaaaggagaagaagcataag
agaaggagcttgagctcaagctctgtggacgaagacaaaaaacacaggcaccattctaaa
gaggaatcgaaagaaacaacccactcacattcccaccatcgcagtgtccccgctggctat
ggactacagtttccagctgtgaggcttcatcagtcttcaaagccccccaaacacttaagg
caccgttctcaggagaggagccgctctcgatcgcctcaaaggacagacgggaacggccat
cattcctctcacaggacagacaaccactcctctcacaaatcagagaaccactcatcccac
aggacagaccagttcaaagttccacagttccagcgccccaaagccccgcccagcccacag
aaagatcgctaccaaaggcatcagagcagtaccaccaaatgtctctctgctgaagagctg
gagaagaagaggagggagatgatggactttgccaaacagagagacgaagagcgtgaaagc
aacattagaagttacaaacgacaggatgaacaggagaaggagcgggagaaagagaaaggt
ggcaagcatgaccacaacgctggctttatccataacatgaagctggagagtgcctccacc
tcttccttggaggatcgagtcaagagaaacatccactccatacagaggacccccgcatcc
ctggagaagaatttcatgaggagatga
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