KEGG   Salmo salar (Atlantic salmon): 100196787
Entry
100196787         CDS       T04363                                 
Symbol
taf12
Name
(RefSeq) TATA-box binding protein associated factor 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100196787 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sasa03021]
    100196787 (taf12)
   03036 Chromosome and associated proteins [BR:sasa03036]
    100196787 (taf12)
Transcription machinery [BR:sasa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100196787 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     100196787 (taf12)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100196787 (taf12)
    STAGA complex
     100196787 (taf12)
    TFTC complex
     100196787 (taf12)
    SAGA complex
     100196787 (taf12)
    SLIK complex
     100196787 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Pheromone
Other DBs
NCBI-GeneID: 100196787
NCBI-ProteinID: NP_001135281
UniProt: B5X4I7
LinkDB
Position
ssa02:complement(35590128..35595843)
AA seq 162 aa
MTQYQPQSNRSNFFTVKAEASSTPPLATSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgccaccagcatggccaatagcagcgctgccgctccagggaag
gtgatgggcacacctggccctgccggcagaattagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagcttgatgaggat
gtggaggagatgctgctgcagattgcagatgacttcattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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