Salmo salar (Atlantic salmon): 100196789
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Entry
100196789 CDS
T04363
Symbol
hcls1
Name
(RefSeq) hematopoietic cell-specific Lyn substrate 1
KO
K06106
cortactin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
sasa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100196789 (hcls1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100196789 (hcls1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100196789 (hcls1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
100196789 (hcls1)
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
100196789 (hcls1)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100196789 (hcls1)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100196789 (hcls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
100196789
NCBI-ProteinID:
NP_001135283
UniProt:
B5X4K0
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All DBs
Position
ssa07:complement(44351785..44358180)
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AA seq
511 aa
AA seq
DB search
MWKSVVGHNVSLKVAEGDDWETDPDFENDVSEQEQRWGAKTIEGSGRKEHISVSELRQKV
SQEHEVGKQKERAEAPKASYGYGGKFGVEKDRMDKGAVGHGYVAQVEQHSSQTDAKRGFG
GKFGVQKDRVDKSAMGFEYKGEVEQHASQKDYSKGFGGKFGVEKEKVDKAALGYDYKGET
EKHQSQKDYSKGFGGKFGVEKEKVDKAALGYDYKGETEKHESQKDYAKGFGGRHGIQTDR
MDKSAVAFTDMESPTSAYEKTLPLEASSAGAGNLKARFENLARSSDEENRKRAEEERARR
QAREKREQEEARRRQQEQNSREEEAEQHQPPPVEEQRPPPIEEQRPPPVEEQRPPPFPEA
NRKPQPPQLPTARALPQIPRDDPEPVEEEEEEEPDYDQPPCLPPRSSDLLEAEPPQEQTP
SEPEQEDEGEYEDIAPVPFPEPDPAVDNDYEDLTCGQTAVAIYDYQGEADDEISFNPDDV
ITNIEMVDEGWWKGQCHGRIGLFPATFVKMM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagtcagtggtgggacacaacgtgagcttaaaggttgcagagggggacgactgg
gagaccgaccctgactttgagaatgatgtgtcagaacaggaacagagatggggggccaag
accattgaggggtctggtcgaaaagaacacatcagtgtatcagagctgagacagaaggtg
tcccaggagcatgaggtggggaagcagaaggagcgagcggaggctcccaaggcctcttac
ggttacggagggaagtttggagtggagaaagaccgcatggacaagggggcagtggggcat
ggctacgtggcacaggtggagcagcactcatcccagactgatgcaaagagaggattcggg
gggaaatttggagtgcagaaagaccgtgtggataagtctgccatgggttttgaatacaag
ggagaggtggagcagcatgcatctcagaaagactattcaaagggttttggagggaagttt
ggggtggagaaggagaaagtggacaaggctgccttgggatatgactacaagggagagaca
gagaagcaccagtctcagaaagactattcaaagggttttggagggaagtttggggtggag
aaggagaaagtggacaaggctgctttaggttacgactacaagggcgagacagagaagcat
gagtcacagaaagactatgccaagggctttgggggacgccatggcattcagacagaccgc
atggataaaagtgcagtggccttcacagacatggaatcccctacctctgcctatgagaag
acactaccattggaggcatcaagcgcaggggcaggcaacctgaaggctcgctttgagaac
ttggctcggtcatcagacgaggagaacagaaagcgagcggaggaggagagagccaggaga
caagctagagagaagagagagcaggaggaggcacgacgcagacaacaggaacagaacagc
agggaggaggaagcagagcagcatcagcctccacctgttgaagagcagagacctccacct
attgaagagcagagacctccacctgttgaagagcagagacctcccccttttccagaggcc
aacaggaagccccaaccaccacagctgcccactgccagggcattgcctcagataccaaga
gatgatcctgagccagtggaggaagaggaggaggaggagccagactatgaccagcccccg
tgcctgcccccacggtcaagtgacctgctggaggcggagccacctcaggagcagacccca
tcagaaccagagcaggaggatgagggagagtatgaggatatcgcaccagtacctttccca
gaacctgatccagctgtggataatgactatgaggacctgacatgcggtcagacagcagtg
gccatttatgactaccaaggagaggcagatgatgagatctccttcaacccggatgatgtc
atcaccaacatagagatggtggacgaaggctggtggaagggacagtgtcatggacgcatt
ggacttttccctgctacattcgtgaaaatgatgtag
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