KEGG   Salmo salar (Atlantic salmon): 100196840
Entry
100196840         CDS       T04363                                 
Symbol
xpa
Name
(RefSeq) xeroderma pigmentosum, complementation group A
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100196840 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    100196840 (xpa)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100196840 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N Ion_trans_N
Other DBs
NCBI-GeneID: 100196840
NCBI-ProteinID: NP_001135334
UniProt: B5XAL4
LinkDB
Position
ssa08:9947871..9956197
AA seq 274 aa
MDLLEPLTPMNDHAASPPSEPKAKNCNLSPAMRAKIERNRQRAVMLRQARLANRPSAGEG
VGTSAKVAKTVDSGGGFFIEEEVETQRKVVHQPAPVIKADYLVCDHCDKSFMDSYLSNGF
DLAVCDNRRDYEVKHKLISRTEAKQLYLLKDCDLDQREPVLRFVLRKNPLNPHWGDIKLY
LRLQVEKRSLEVWGSEEALEEAKEAREENREVQKQKRFNKKVKELRCAVRRSMWTKGTSA
HQHEYGPEELVDEEEDLYRKVCNTCGHELTYEKM
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatctgttggagcccctcacgccgatgaatgatcatgctgcttctcctccttcagag
cccaaagccaagaactgcaatctgtcccccgctatgagagccaagatcgaacggaacaga
cagcgggctgtgatgctgaggcaagcccgactggccaacagaccatcggctggagagggg
gttggaacctcggctaaagtcgccaagacagtcgactctggtggagggttcttcattgaa
gaagaagtggagacgcaaaggaaagtggtgcatcaaccagcccctgtgataaaggcagac
tatctggtgtgtgatcactgtgacaagtcgtttatggattcctaccttagcaacggcttc
gatctggcagtctgtgacaaccgcagagactacgaggttaaacacaagctgatatcccgt
acggaggctaagcagctctacctactgaaggactgtgacctggaccagagggagccagtg
ctgaggtttgtcctgaggaagaacccactcaaccctcactggggagacatcaaactctac
ctcaggctccaggtggagaagcgctccttagaggtgtggggctctgaggaggccctggag
gaggccaaggaagcaagagaggagaacagggaggtgcagaagcagaagcgcttcaacaaa
aaagtcaaagagctgcgttgtgcggtgaggagaagcatgtggaccaagggaaccagtgct
caccagcacgagtacggccctgaggaactagtggatgaagaggaggatctctacaggaag
gtctgtaacacctgtggacacgaactgacctatgagaagatgtag

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