Salmo salar (Atlantic salmon): 100196890
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Entry
100196890 CDS
T04363
Symbol
calcoco2, Ndp52b, caco2
Name
(RefSeq) calcium binding and coiled-coil domain 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100196890 (calcoco2)
04137 Mitophagy - animal
100196890 (calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100196890 (calcoco2)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
100196890 (calcoco2)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Xenophagy
Cargo receptors
100196890 (calcoco2)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100196890 (calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKICH
DUF745
TolA_bind_tri
Halo_GVPC
Motif
Other DBs
NCBI-GeneID:
100196890
NCBI-ProteinID:
NP_001135383
UniProt:
B5DGE2
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All DBs
Position
ssa28:complement(1055587..1065183)
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AA seq
550 aa
AA seq
DB search
MESFETAANMGLSTNFSQVVFQEIPNSYVSNVALTCCYTLTAAIQPNPRDWVGIFKVGWS
TTKDYHTFVWVEPSLDLIGLEPVRKQVLFTAYYLPKDDAAFYQFCYIDSNDQVRGASTPF
CFKTPGEQSTDCSLENDLLVIITQEKVEQREREKEELVMELGQLKEQNETLRSALKEQQQ
EIDHLKMSNEELYQADGNTENKRENARKHEELTQNTKLMDDSHRGQETLTTICEKYEQAL
IKIKQLKKEREELKGKVEVQSVEIAQLSPRLKESEQESHKLKDHIQLLQVDLQSSEKEKE
KLQDLKTENKALRRSLSEQEQQPLQMVDIDWKEQYQALLGQLEEAQTQLHKELQASNNTR
KRAEQAERELEELKECMESTAMTSDQTKQKSSKLEMQLSELNEIIEEKENMAEIAKVEKE
ELSRENQDLKRDIERLRKEFDDVQAAAVPMQHPNPYGSSTDPTANKEQQQQEALADSLHF
GNPYETPGTATNLEEELSLECRHCHESFPGITQDELELHEHSHRACPFCTLICDGMEQAL
YEDHVYSHEV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttcgaaactgcagccaacatgggattgtcaacaaacttttcccaggttgtg
tttcaggaaatcccaaactcatatgtgtcaaatgttgccttgacttgctgctacactctg
acagcagccatccaaccgaatcccagagactgggtggggatattcaaggtgggctggagc
accacaaaggattatcacacatttgtgtgggtagaaccatcattggatctgataggactg
gagccagtcagaaaacaagtgctttttactgcatactacttgccgaaggatgatgcagcg
ttctatcagttctgctatatcgatagcaatgaccaagtgagaggagccagcacccccttc
tgctttaaaaccccaggggaacaaagcacagactgcagccttgaaaatgacctcttggtt
atcataactcaggaaaaggtagagcagcgtgagagggagaaagaagagctggtcatggag
ttggggcaactgaaagaacaaaatgagactctgagaagtgctctgaaagagcaacagcaa
gagattgatcacctcaagatgtcaaatgaggaactataccaggcagatggtaacacggag
aataagcgggagaatgcaagaaagcatgaagaactgacacagaacactaaactaatggat
gactcacacagagggcaggagactctgacaactatttgtgagaaatatgaacaagcgttg
atcaagataaaacagctgaagaaggagcgagaggagttgaaaggaaaggttgaggtccaa
agtgtggaaattgcacagctgagcccaaggctcaaagaatctgagcaggagtcccacaaa
ctgaaggatcatattcagcttctacaggtggatctccagagcagtgagaaagagaaggag
aagctacaggacctgaagactgagaacaaggcattacgtagaagcctgtcagagcaggag
cagcagccactgcagatggtggacattgattggaaggagcaataccaagcccttctgggc
cagctggaggaggctcagacacagttgcacaaggagttgcaggcttccaacaatacccgc
aaacgtgcagagcaagcagaaagggaactggaggagctcaaggagtgcatggagagcacg
gccatgacgtctgatcagacaaagcagaagagcagcaaactagagatgcaactttcagag
ttaaacgaaatcattgaggagaaagaaaacatggcagagattgctaaagtagagaaagag
gagttgtccagagagaatcaggatctcaaaagagatattgaaagacttcgcaaggaattt
gatgacgtccaggctgctgcagtgcccatgcagcatcccaacccttatggctcttcaact
gaccctaccgccaataaggagcagcagcagcaagaggcactggctgactctctccacttt
gggaacccatatgaaaccccaggcacggctacaaacctggaggaagagttgtccttggag
tgtcgtcactgccatgagtccttccctggcatcacccaggacgagctggagctgcacgag
cacagccacagagcgtgccccttctgcaccctcatctgtgacggaatggagcaggcttta
tatgaagaccacgtctacagccacgaggtgtag
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