Salmo salar (Atlantic salmon): 100196894
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Entry
100196894 CDS
T04363
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100196894 (rpap3)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100196894 (rpap3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_19
TPR_11
TPR_12
TPR_16
TPR_9
ARM_TT21_4th
ANAPC3
TPR_10
Motif
Other DBs
NCBI-GeneID:
100196894
NCBI-ProteinID:
NP_001135387
UniProt:
B5X4C5
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All DBs
Position
ssa17:complement(43908673..43921710)
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AA seq
661 aa
AA seq
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MSENKAIELQLQMRQNAEDLHNFMKDLDSWETDIKRKDEQLRTGSVGVSQKSLPPVRNKD
YKKKREKKKASDNNAKIEPKQARRIKSHDDQSWDKFDVDKVLESMDKEDSAESNDSESED
SGVPATDQDKALAEKEKGSQLFKEGKYDDAIECYTRGMGADPYNPVLPTNRAACFFRLKK
FAVAESDCNLSIALDSNYFKAFAQRGASRFALQNYESALEDYVMVLKLDPGNLEAQNEVM
KCKEVIAKLGGKAESPEAAVVTPPVVDVMQQQLMEEQQRRQEAVVQKDRGNAYFKEGKYE
AAVEYYTKGMEADSTNILLPANRAMAYLKLQRYKEAEEDCSKAIALDGTYSKAFARRGTA
RAALGLLKQAKEDFEEVLKLEPGNKQAFHEIKKIAIDMGTSGLLATEEHAQRRTVQPVNK
PPHLQSTKPLRSVDIEEVCGKILVQEESSAVLTSTTAPRVRPQKTTSIADTVREGQASPP
STSPRTKILKIEEISNVPSHSPVKGHEGYAVRAQTQKHREATVSEPTEPPATPSTEVIPP
APTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQILRTLQGFYIK
KEEPPVILEILRNLAGVRRFDMAVMFMSNPEKKVLQELFDFLHQAGLEDTSVGALQKKYG
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaatgcagaggacctg
cataacttcatgaaagatcttgacagctgggaaactgacataaagaggaaggatgagcaa
ctaagaactgggagcgttggcgtgtctcaaaaaagcctcccaccagtgcgaaacaaggac
tacaaaaagaagagagagaaaaagaaggcatcagacaacaatgcaaagattgaaccaaaa
caagcacgcaggataaagtctcatgacgatcagtcatgggacaaatttgatgtggacaag
gtattggagtccatggataaagaggacagtgctgagtccaatgactctgagtctgaggat
tctggggttcctgctactgaccaagacaaggcgcttgctgagaaggagaaaggtagtcag
ctgttcaaagaagggaagtatgatgatgccattgagtgttacaccagaggcatgggcgca
gacccttataaccccgttctgccaacaaaccgagctgcctgcttcttcagactcaagaag
tttgctgttgccgagtctgactgcaacttgtccattgctctggacagtaactacttcaaa
gcatttgcacaaagaggagcgtctcgattcgccctgcaaaattatgaatctgccctagaa
gattatgtaatggttctcaagctggatcctgggaacctggaggcacagaatgaagtgatg
aaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagcccagaggctgcagtg
gtgacaccacctgtggtggacgtcatgcaacagcaactcatggaggaacagcagaggaga
caggaggcggtggtgcagaaagacagggggaatgcatatttcaaagaggggaagtatgag
gcagcagtagagtactacaccaagggcatggaagcggacagcaccaacatcctcctgcct
gccaaccgggccatggcttacttaaagctgcagagatataaagaggctgaggaggactgc
agtaaagcaatagccctggatggcacctattcaaaggcctttgcccgcagagggacagcc
agggctgctctgggactgctcaaacaagctaaagaagattttgaggaggtcctgaagctg
gaaccaggaaacaagcaggcatttcatgaaattaagaagattgcaattgacatgggcacc
agtgggctgctggcaacagaagagcatgcacagcggagaacagtacagccagttaacaaa
ccacctcacctgcagtcaaccaagccattgaggagcgttgacattgaagaggtttgtgga
aagatcctggtccaggaggagtcctcggctgtgttgacttcaaccacagccccccgtgtt
aggccccagaagaccacctccatcgcagacactgtgagagagggtcaggcctcgcctccc
tctacctcccccagaactaagatcctgaagattgaagaaatatcaaacgtcccctcgcat
tcccctgtcaaagggcatgaggggtatgctgtgagagcacagacacagaagcacagggag
gcaactgtcagtgaaccaacagaaccgcctgctacaccctcaactgaggtcatacctcct
gcccccaccaacagcttccagctagaggcagacctaaggaagattggaaatggccctgaa
gtcatctacaagtatttgaagcaaatccagcctcaggcttacgcaaagatcttccagagc
tctcttgaaccagacatgctcaatcagattctaaggacgttacaaggcttctacatcaag
aaggaagagccacctgtcatactggagatcctcaggaatctggccggtgtgaggcggttc
gacatggctgtcatgttcatgtccaaccctgagaagaaagttctacaagaattgtttgac
tttcttcatcaagctggacttgaggacacatcagtaggagccctgcaaaagaagtatgga
gtgtga
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