Salmo salar (Atlantic salmon): 100286412
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Entry
100286412 CDS
T04363
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100286412
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100286412
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
100286412
NCBI-ProteinID:
XP_014008341
UniProt:
A0A1S3N023
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Position
ssa17:35254522..35292904
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AA seq
1781 aa
AA seq
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MLILHIASLLTLWWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREMYDERLNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYDCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFSKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCSPVDGIHVGTEGMVHGHCMCNH
NTEGLNCDHCKDFYNDLPWRPAEGHNTNACKMCECNHHSRSCHFDTAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDSAGSLQGGVCDGRTDVSAGLI
TGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDQCLPHHWGLSNDMDGCRPCDCDQGGAINNDCSPISGQCQCREHMYGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVKVVPRPYPLNRSPTWTGAGFVNVPEGAHLEFHINN
IPDSMDYDMLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPVSTCENTLPGGDQQLVSLPPE
SRHVVLPRPVCLDKGRNYTLRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELELFEGSRG
KEAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
RGGQCRCRPNMAGRNCDRCAPATFLFSPSGCRPCECNPVGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCRPCQCNGNSDYCHSQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADGCYQTANNYQLVCVCSPGYRGARCDECAPGHYGNPQ
VPTGRCLPCQCNDNIDQLDPGSCNARTGVCLKCLHHTEGYGCQRCKLGYYGNAATQSCRR
CMCYSVGTTSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCAPDTFNIGSGQGCQTCDC
DQTHSFGTSCNELSGQCSCRPGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGEFPACQRCHQCFGEWDRVVGELTNQTQRLKDHVTE
LQTNGVTAPYTDTVSSLEISAKAISEIVENNPAIQKTEDVQQMMQQVTEMVADLNERLNV
SEDSLSRLVVNANYTEASLDALREQAQGLERTVKDIGDHIKTVKNSNIEGAMDTITDAHF
ESKGAEIRVNRTTSYPDNTLEQSATLRREAEARLNQNQAEFDLRQQKHTERLERLTTELD
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSGDGTHRCGGDGCDGLITQTQSTLKTAK
DFDQEILSTMQEVDKLSRLVWEVKVHADEAKLSAREVLLKSNQSRDRVEHTNEQLRSFIK
EIRDLLTNDRANVEVIEAVSNEVLALEMPTSPGQLEVLTKEIRDRVGTLTSVEDILSQSA
NDIHTAERLLEQARTASQEASEVKETAALVKEALDTTERAQNAAIDAVKKAHNNTRGTLI
LITSVESETAESELRLSNATQRLLQLERDVTLLRESSLDTSHRTQNTERLSETARQDAEQ
ALQEFDSEVKGQYSFVEGLVVTKAEGVSDAKKRAELLQQEAKELLTQTSGKLQRLRELER
SYAANQRTLEAKAGQLAGLEKTARQLLDDISQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgcacatcgcatcacttttgaccctctggtggcggtcctttgcgcagctg
cctgagtttggggatgtttgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcaccagctcaccgcctcctccacctgcggcattgagaagcctgaacgc
ttttgcattgttggtcacctggaggaggagaagaagtgttttgtgtgtgactccagggag
atgtatgatgagaggctgaaccacacgaccagccacagcatcgaaaacttggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagaca
ttccgtccggctaccatggtgattgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctacgactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagtttagtaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactattacgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaagtgttcccct
gtcgatgggatacatgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgaccactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacacaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacacggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgactct
gcgggctccctgcagggtggtgtgtgtgatggcaggacagacgtgtctgctggtctgata
acaggacagtgtcgctgtaagaccagtgtggagggagagcgctgtgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaaccctctg
ggcacgctgcctggagggagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtgaccagtgtctgccgcatcactgggggctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggtggagccatcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggattctacttcatcgccctggaccactacacctatgaggctgaggacgccaag
cacggccctggtgtgaaggtggttcccaggccctatcctctgaaccgtagtcctacctgg
acaggggcagggtttgtcaacgtacctgagggagcccacctggagttccacatcaacaac
atacctgactccatggactacgacatgctgatccgctatgaaccacagttgcctgagcaa
tgggagcaggtggagatcagagtgatacgtccttactcaatgagagtaggacagccagtc
agtacatgtgaaaacacgctaccaggaggagatcagcagttggtgtctcttcctccagaa
tccagacatgtggtgctcccaaggcctgtgtgtctggacaagggacggaactacaccctg
cgtctcagtctgcctctctactcctctctcagtgacgtccaaagcccctacacactcatc
gactccttggtgttgattccgcgggtacgtgagctggagttgtttgagggttctcggggg
aaggaggcgtgggatacgttccagaggtatcgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgtaacaactacatattcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctcgctcagtgcggtgtgcgacccc
agaggcgggcagtgccggtgtcggcccaacatggcgggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccctcaggatgcagaccctgtgagtgtaatcctgtgggt
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgtgccaggggcatca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccggccctgc
cagtgcaacggcaacagcgactactgccactctcagactggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtccagacgggccggggagcggacgc
cagtatgcagacggctgctaccagaccgccaacaactaccagctggtctgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccaccgggcgctgtctgccctgccagtgtaatgacaacattgaccagctggacccg
gggtcctgcaatgctcgcacaggcgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgttgcaagctgggttactacggcaacgccgccacccagagttgcaggagg
tgtatgtgttattcagtgggcacgacgtcggaggcgtgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgtgac
cgttgtgcccctgatacgttcaacataggaagtggacagggctgccagacctgtgactgt
gaccaaacccactcatttgggacgtcgtgcaacgagctgtcggggcagtgctcatgcagg
ccaggtttcggtggaagaaaatgcaacgaatgccgagataagttctggggagatcctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccagtgtgcc
agagggtaccatggggagttccccgcctgccaacgatgccaccagtgcttcggcgagtgg
gaccgcgtggtaggggaactgaccaaccagactcagcgtttgaaggatcatgtgacagag
ctccagaccaatggggtgacggcgccgtacacagacaccgttagcagtctggagatcagt
gctaaagctatcagtgagatagtagagaacaaccctgctatacagaaaacggaagatgta
caacagatgatgcagcaggtcactgagatggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtcttgttgtaaatgccaactacaccgaggccagtctggac
gcactgagagagcaggcccaagggcttgagagaacagtcaaagacattggagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccgatgcccacttt
gagtctaagggggcggagatccgtgtcaatcggaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgaaccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggcttaccacggagctcgac
actcttgacctatcagagctcagcaagcagacatgtggagcggctggtggggaggagggg
tgtgctgcgtcaccctgtggaggggtggggtgtgtgtcgggggacggcacccatcgctgt
ggtggagacgggtgtgacggtctgatcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctgtccaccatgcaggaagtggataagctctctagattggtg
tgggaggtgaaggtgcatgcggacgaggccaagctgagtgctcgggaggtgctgctgaag
tccaaccagagccgagatagagtggagcacaccaacgagcagctccgcagcttcatcaag
gagatacgagacctactcactaacgaccgtgccaacgtggaggttatcgaagcggtgtcg
aacgaggtgttggccctggagatgcccacgtcgcccgggcagctggaggtcctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgttggagcaggctcgcaccgccagtcaggaggcg
tctgaggtgaaggagacagctgccctggtgaaggaggctctggatacaactgagcgtgct
cagaatgctgccatcgacgccgtcaagaaggcccacaacaacaccaggggaacacttatc
ctcatcacatctgtggagtctgagacggcagagtcagagctgcgtctgagtaacgccaca
cagcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctggacacc
agccaccgcacacagaacactgagagactgtctgagaccgccaggcaggacgcagagcag
gccctgcaggagtttgactcggaggtgaagggtcagtacagttttgtggagggcttggtg
gtgacgaaggcagagggcgtgtctgatgccaagaagagggcggagctactccagcaggag
gccaaggagctgctcacccagaccagcggaaaactacagagactcagagagttggagagg
tcgtatgcagccaaccagcgtactctggaggccaaggcaggtcagctggctgggctggag
aaaacggcacgccagctgctcgatgacatcagccagaaagtcatggtctacagcacctgt
tcttag
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