Salmo salar (Atlantic salmon): 100286442
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Entry
100286442 CDS
T04363
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100286442 (vps52)
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
EARP complex
100286442 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
100286442 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_CC
Sec3_CC
zf-RVT
MscS_porin
CoV_NSP7
COG6_N
DUF1664
Cep57_MT_bd
ParA
ATG16
CENP-F_leu_zip
DIKK1-2-4_C-subdom1
FlaC_arch
DUF5740
Motif
Other DBs
NCBI-GeneID:
100286442
NCBI-ProteinID:
XP_013997199
UniProt:
A0A1S3M2U3
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All DBs
Position
ssa14:59519480..59522216
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AA seq
300 aa
AA seq
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MVEGAVTVAVFDVNIAGNSTANVMSYLQDEMQPDTDAMAPLNLGELDLTTNEFILDEVDI
HIQANLEDDLVKEALKTGVDLRHYSKQVEGELQRIEQASIKDYIKESQNIASLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
AMIQVIVDSPVTEQEFLDQLHELNNKINFAKELSFKETLACSDVQDIVCDTTIPSARFFW
SNICGDIQWGKAWKIVNKYCISNKVKEVSFKMLHGIYPVKHVLERFKLNIDYNCDFCGME
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggtgcagtgactgtagctgtgttcgatgtaaacatagctggtaactcgacg
gcgaatgtcatgtcatatttacaagatgagatgcagcctgacacagatgccatggcccct
ctcaacctgggtgagttggacttgaccacaaacgaattcatcttggatgaagtggatatt
cacatacaagctaatctggaagatgacttggtgaaggaggcactgaaaacaggagttgac
ctcaggcattactctaaacaggtggagggtgaactccaacgaattgaacaagcttccatc
aaagactatatcaaggagagccagaacattgcctctctgcacaaccagatcacagcctgt
gactccatactggagcgaatggagggcatgctgagcggcttccagagtgacctctcgtcc
atcagcagtgagatccagactctgcagcagcagtcggtcagcatgaacgtgcggctgaag
aacaggcaggccgtacgcagccacctcagccaactggtggatgagctggtggtgcccgga
gctatgatccaggtaatcgtggatagcccggttacggagcaggagttccttgatcagctc
catgagctcaacaacaagatcaattttgccaaagagctcagcttcaaggagactttggcc
tgctctgatgtccaggacatcgtttgtgatactacaattccctcagcaagatttttttgg
tcaaatatctgtggtgatatacagtggggcaaagcatggaaaattgttaacaaatattgt
atcagtaacaaagtaaaggaagtttcatttaaaatgttacacggaatttatcctgtgaaa
catgttttggaaagattcaagctaaatattgactataactgtgatttctgtggaatggag
tag
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