Salmo salar (Atlantic salmon): 100286604
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Entry
100286604 CDS
T04363
Symbol
rpb4
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03020
RNA polymerase
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100286604 (rpb4)
09124 Replication and repair
03420 Nucleotide excision repair
100286604 (rpb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100286604 (rpb4)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100286604 (rpb4)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
100286604 (rpb4)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100286604 (rpb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Rop
Motif
Other DBs
NCBI-GeneID:
100286604
NCBI-ProteinID:
NP_001140015
UniProt:
B9EP00
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All DBs
Position
ssa20:complement(54384332..54386920)
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AA seq
143 aa
AA seq
DB search
MASSGGSTTTVGDIEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSVE
GRFEDEELQQILDDIQTKRSFQY
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtggcggttcaacaacaactgtcggagatatcgaggaggacgcttctcag
ctactttttcccaaagagttcgagaatgcggaaacgcttctaaactctgaggtacacatg
cttctggagcatcgcaagcagcagaacgagagtgcagaggacgaacaagagctatctgag
gtcttcatgaaaactctgaattatactgcacgtttcagccggttcaaaaacagagaaact
atcgccagtgttcgcagcttgctcttgcagaagaaactgcataagtttgagttagccagt
ttggccaacctttgtccagaagcagcagaggaggccaaagccctcatccctagtgtggag
ggtcggtttgaggatgaggagctgcagcaaatccttgatgacattcagaccaagagaagt
ttccagtactga
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