Salmo salar (Atlantic salmon): 100306809
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Entry
100306809 CDS
T04363
Symbol
vps51, ck002
Name
(RefSeq) VPS51, GARP complex subunit
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100306809 (vps51)
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
EARP complex
100306809 (vps51)
Endosome - Golgi transport
Tethering complex
GARP complex
100306809 (vps51)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
COG5_N
YxiJ
Sec8_N
Vps53_N
TMTC_DUF1736
IFT57
DUF2115
Occludin_ELL
COG4_N
Motif
Other DBs
NCBI-GeneID:
100306809
NCBI-ProteinID:
NP_001158820
UniProt:
C0H918
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All DBs
Position
ssa11:complement(75864761..75874283)
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AA seq
840 aa
AA seq
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MDGDINATAPGTTPPDSDPARKRRVHGMLKLYYGLNEEGKTVDQAESMDPCDINGPHFDP
EVYLNKLRRECSLGELMDQESYMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFK
KMEDEMDCLSTNMASITDFSARISGTLQDQHAQITKLSGVHTLLRKLQFLFELPARLNKC
LELQAYAQAVSSHRRARCVLLQYSHMPSFRGIQDDCHAIMDKLAQELRQKFRDGGSSAKD
LSECVELLLQLDEPAEELCDKFLSHAQSRLEADLLGLEAELRPPLSSGPTAVTDPYTGPA
RRLSVEPTAGSPTGPTSLNNPFLSPSSRTDILEFIDRGCNEFVSSLCLVIASYQELFVNR
PQEGELASKNIPQMAIGKLHAFVDALATHYFSLVERRIQEEKSVGDNSLLVRALDRFHRR
LQAVAKLLPGSAVPSQGTEIVVRAARERIKQYLAALQSFYLNSLTDVRQALAAPRLGGSS
AGGGSHLGGPATGKDAPASLPELLSTLSATILNQIKSVLASVHLFTAKDITFSNKPYFKG
EFCSHGVRESLVVNFIKFVCQSSRQFCESAGDRGGSTPPALLLLLSHLCLDYETSTITYI
LTLTDEQFLVQHHSPVTAVTALCGEAREAAQKLLNHYVKVQGLIISQMLRKSVETRDWVN
TIEPRNVRAVMKRVVEDTTSIDVQVGLLYEEGVRKAHSSDSSKRTFSVYSSSRQQTRYAP
SYTPSAPMDTNLLSNIHKLFSERVEIFSPVEFNKVSVLTGIIKISLKTFLECVRLRTFGR
YGLQQIQVDCHYLQMYLWRFVSDENLVHFLLDEIVGSTAHRCLDPAPMEQSVIEVICERG
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatattaatgctacggctccgggcaccaccccacctgactccgacccagcg
cggaagcgcagagtgcacggtatgttgaagctctactatgggctgaacgaggaaggaaag
accgtggatcaagctgagtcgatggatccttgcgatataaacgggccgcatttcgatcct
gaggtttatctcaataagctccggagagaatgttcccttggagagctgatggaccaggag
agctacatggtcaagcagatccgctccttggacagtgacatgcagacattggtgtatgag
aactacaacaaattcatctctgccacagacacaatcagaaaaatgaagaatgattttaag
aagatggaggatgaaatggactgtctctctaccaacatggcttctatcacagatttcagt
gcacgcatcagtgggactcttcaggaccagcatgcacagatcaccaaactgtcaggagtc
cacactctcctgaggaagctgcagttcctgtttgagctgcctgccaggctgaataagtgt
ctggagctgcaggcctatgcccaggcagtgagctcccatcgccgtgcccgctgcgtgctg
ctgcagtacagccacatgccctccttcaggggcatccaggatgactgtcatgccatcatg
gacaagttggcacaggagcttaggcagaaattcagagatggaggttcgagtgcgaaggac
ctttcagagtgtgtggagcttctgctgcagctggatgagccggcagaggaactctgtgac
aagttcctgagtcacgcccagtcacgattggaagcagacctcctaggactggaggcggag
ctgagaccaccattgtcctctggacccacagcagtgacagatccctacactggccctgcc
cgcagattgtcagttgaacccactgctggatctcccactggccccacctctctaaacaat
cccttcctctctcccagctcaaggactgatattttggaattcatagacagaggttgcaat
gaattcgtcagcagcctttgcttggtcattgcctcgtaccaagagttgtttgtcaaccgt
ccacaagagggtgagctggcctccaaaaacatcccccagatggctattggcaagctgcat
gcttttgtggatgccctggccacccactacttctccctggttgagaggaggatacaggag
gagaaaagtgttggagacaactctctcctggtccgggctctggaccgtttccaccgcagg
ctccaggccgtggccaaactgctgcctgggtctgctgtgcccagccaggggactgagatc
gtagtgcgagcagccagggagaggatcaagcagtacctggcagctctgcagagcttctac
ctgaacagcctgacagacgtgaggcaggccctagcagcccctcggctgggtggaagctca
gccggaggtgggtctcatctaggggggccagccactgggaaagatgctccggccagcttg
ccagagctcctctccactctgtctgccaccattctcaatcagatcaagtcagtcctggca
tccgtgcacctctttactgcaaaggacatcaccttctccaacaagccttacttcaagggg
gagttttgtagccacggtgtgcgtgagagcctggtggttaacttcattaagtttgtgtgc
cagtcctcgcgtcagttctgtgagagtgcaggagaccggggcggctctacaccccctgcc
ctcctactgctgctgtcacacctctgcctggactatgaaacctccaccatcacctacatc
ctcaccctcacagacgaacagttcctcgtgcagcatcactctcctgtaactgcagtcaca
gctttatgtggagaggccagagaggcagcacagaagctactgaaccattatgtcaaggtt
cagggcctgatcatatcccagatgctgagaaagagtgtggagacacgagactgggtcaac
accatcgaaccacggaatgtccgtgctgtgatgaagagagtggtggaggataccacctct
attgatgtgcaggtgggtcttctctatgaggagggggtgaggaaagcccacagcagtgac
tccagcaaaaggacgttttccgtctatagcagttcgaggcagcaaacccgctacgcccct
agctacacacctagtgctcctatggataccaatctcctgagtaacatacacaagctcttc
tctgagcgggttgaaatattcagtcctgtggagtttaacaaggtctctgtgttgacggga
atcataaagatcagtctgaagacgtttctggagtgtgtccgcctgcgtacctttggtcgt
tatggcctgcaacagatccaggtggactgccactacctgcagatgtacctctggcgcttc
gtctccgatgagaacctggtccacttcctgctcgatgagatagtgggcagcactgcccac
cgctgcctggaccccgctcccatggagcagagcgtcatcgaggtcatctgtgagagaggt
taa
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