KEGG   Salmo salar (Atlantic salmon): 100306824
Entry
100306824         CDS       T04363                                 
Symbol
vps33a, vp33a
Name
(RefSeq) VPS33A, CORVET/HOPS core subunit
  KO
K20182  vacuolar protein sorting-associated protein 33A
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04140  Autophagy - animal
sasa04142  Lysosome biogenesis
sasa04145  Phagocytosis
sasa04148  Efferocytosis
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    100306824 (vps33a)
   04142 Lysosome biogenesis
    100306824 (vps33a)
   04140 Autophagy - animal
    100306824 (vps33a)
   04148 Efferocytosis
    100306824 (vps33a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100306824 (vps33a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    100306824 (vps33a)
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100306824 (vps33a)
   Hops complex
    100306824 (vps33a)
SSDB
Motif
Pfam: Sec1 RMD9_mid Takusan
Other DBs
NCBI-GeneID: 100306824
NCBI-ProteinID: NP_001158835
UniProt: C0H961 A0A1S2X6T2
LinkDB
Position
ssa20:25829429..25848118
AA seq 599 aa
MSAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTGTRNIYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GESRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtctgcgcacttatcctatggaagagtcaatttaaacattttgagggaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgaccggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgacgtgaaaaatataatc
ttctttgtccgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctt
tgtgagcagcggctgaaggagcagggggtcctgggctcgttcatcaacatagacgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaagtgaccagacaagtctgtaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgtttgactcactgctgctgctggaccgcaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgatgaagtttatggaatcaccaacggttat
gtgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccaccgagcccaagaagatgcagctcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaatgccataggggctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgaa
ctcataaaagacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactgtattgcccag
aaggatcctctgatcaaaatcttgcggctggtctgtatgcagtcagtctgcaacaacggc
ctcaagcagaagatattggactactacaagagagagatcctgcagacatatggatacgaa
cacatgcttaccctcaacaacctggagaagacaggtcttctgaagccccagacaggcacc
aggaatatctaccccactatcagaaagacactcaagctttggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccggctggcgcagcatcgaggaagttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagagcaggaccaccctggtgttctttctgggaggggtgacatatgcagaaattgct
gccctgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgctactacc
aagctcatcaatggtaccagctggatcaagtctctgatggaccgcccggaggccccctga

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