Salmo salar (Atlantic salmon): 100306824
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Entry
100306824 CDS
T04363
Symbol
vps33a, vp33a
Name
(RefSeq) VPS33A, CORVET/HOPS core subunit
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
sasa04142
Lysosome biogenesis
sasa04145
Phagocytosis
sasa04148
Efferocytosis
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100306824 (vps33a)
04142 Lysosome biogenesis
100306824 (vps33a)
04140 Autophagy - animal
100306824 (vps33a)
04148 Efferocytosis
100306824 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100306824 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100306824 (vps33a)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100306824 (vps33a)
Hops complex
100306824 (vps33a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Takusan
Motif
Other DBs
NCBI-GeneID:
100306824
NCBI-ProteinID:
NP_001158835
UniProt:
C0H961
A0A1S2X6T2
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Position
ssa20:25829429..25848118
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AA seq
599 aa
AA seq
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MSAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTGTRNIYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GESRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcctatggaagagtcaatttaaacattttgagggaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgaccggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgacgtgaaaaatataatc
ttctttgtccgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctt
tgtgagcagcggctgaaggagcagggggtcctgggctcgttcatcaacatagacgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaagtgaccagacaagtctgtaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgtttgactcactgctgctgctggaccgcaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgatgaagtttatggaatcaccaacggttat
gtgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccaccgagcccaagaagatgcagctcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaatgccataggggctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgaa
ctcataaaagacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactgtattgcccag
aaggatcctctgatcaaaatcttgcggctggtctgtatgcagtcagtctgcaacaacggc
ctcaagcagaagatattggactactacaagagagagatcctgcagacatatggatacgaa
cacatgcttaccctcaacaacctggagaagacaggtcttctgaagccccagacaggcacc
aggaatatctaccccactatcagaaagacactcaagctttggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccggctggcgcagcatcgaggaagttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagagcaggaccaccctggtgttctttctgggaggggtgacatatgcagaaattgct
gccctgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgctactacc
aagctcatcaatggtaccagctggatcaagtctctgatggaccgcccggaggccccctga
DBGET
integrated database retrieval system