Salmo salar (Atlantic salmon): 100306835
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Entry
100306835 CDS
T04363
Symbol
lamp1
Name
(RefSeq) lysosomal-associated membrane protein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa03273
Virion - Lassa virus and SFTS virus
sasa04140
Autophagy - animal
sasa04142
Lysosome
sasa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100306835 (lamp1)
03272 Virion - Hepatitis viruses
100306835 (lamp1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100306835 (lamp1)
04142 Lysosome
100306835 (lamp1)
04140 Autophagy - animal
100306835 (lamp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100306835 (lamp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100306835 (lamp1)
04090 CD molecules [BR:
sasa04090
]
100306835 (lamp1)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100306835 (lamp1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
100306835 (lamp1)
Other autophagy associated proteins
RNautophagy/DNautophagy
100306835 (lamp1)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
100306835 (lamp1)
CD molecules [BR:
sasa04090
]
Proteins
100306835 (lamp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
DEC-1_N
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
100306835
NCBI-ProteinID:
NP_001158846
UniProt:
C0H980
LinkDB
All DBs
Position
ssa16:complement(81772869..81774168)
Genome browser
AA seq
419 aa
AA seq
DB search
MTRTCPFVVGIACFAILGCVTVVQSQVTLEVTEGNSTCIKAELSASFSITYDTANGTRTV
MVPLPGSAVVGVASSCGGDGRSPWLVALFGDGHALGLGFSSNDSLYSVAKLTLQYNLSDV
SNFPEANSTDVVTVETTSVGMVARVNTTYRCISASPVIVGGATVTFSNVTMEAFMTGEDL
SPNESVCTADQSFTTAPPPPPSTTTAAPAPVPTPPGTPSQGSYSVSNSNGTVCLLARMAL
QLNISHFSASQNKTIQEVVNLLPNQTTSSGSCDPTSATLVLTQANATNLSFLFTLNSTSN
RYHLTGLSVVAAWSDMTAPFNTSNSSLDYQRGSLGRSYMCISEQTLVVDQNFSLNTFQLQ
VQPFGITRGQFAQAEECQLDQDNMLIPIVVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaacatgtccgttcgttgtcgggatcgcctgctttgcgattcttggttgtgtg
acagtagtccagtctcaggtcactctggaggtgacagagggaaactccacctgtataaaa
gctgaactctccgcctccttctccatcacctatgacaccgccaacggcacgcgtacggtg
atggtgcccctcccagggtcggcggtggtgggtgtggccagctcgtgtgggggtgacggc
cgctccccctggctcgtggcgttgttcggggatggccacgccctgggcctcggcttctca
tccaatgacagtctgtacagcgttgctaaactcaccctgcagtataacctcagtgatgtc
tccaacttcccagaggccaacagcaccgatgtggtaactgtggagacgacctcagtaggg
atggttgctagggtcaacaccacctacagatgtatcagcgcctcacctgtcattgtggga
ggagccaccgtcaccttctctaacgtcaccatggaagccttcatgacaggagaggatctg
agccccaacgagagtgtgtgtactgctgaccagagcttcaccacagccccgcctccaccc
ccctccaccaccacagcagcccccgcccccgtccccaccccccctggaacccccagccag
ggcagctactctgtctccaatagcaacgggaccgtctgtctgctggcccgcatggcactg
cagctcaacatctcccacttctctgcctcgcagaataagactatccaggaagtagtaaac
ctgctgcccaatcagacgaccagctcaggatcatgtgaccccaccagcgccaccctggtg
ctgacgcaggccaatgccacaaacctcagcttcctgtttactctgaacagcacgtctaac
aggtaccacctgactggtctgtctgtggtagcagcttggtctgatatgacagccccgttc
aacaccagtaacagtagtctggactaccagcgtggctccctgggccgtagctacatgtgt
atttcagaacagactctggttgtagaccagaacttctccctcaacaccttccagctgcag
gtccagcccttcggcatcaccagaggacagttcgcacaagcggaggagtgccagttggat
caggataacatgttgattcccatcgttgtgggagccgctctggccggcctggttctcatc
gttctcatcgcttacctcatcggcaggaagaggagccatgctggataccagaccatctga
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