KEGG   Salmo salar (Atlantic salmon): 100329194
Entry
100329194         CDS       T04363                                 
Symbol
irf7b
Name
(RefSeq) interferon regulatory factor 7B
  KO
K09447  interferon regulatory factor 7
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa04623  Cytosolic DNA-sensing pathway
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100329194 (irf7b)
   04621 NOD-like receptor signaling pathway
    100329194 (irf7b)
   04622 RIG-I-like receptor signaling pathway
    100329194 (irf7b)
   04623 Cytosolic DNA-sensing pathway
    100329194 (irf7b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100329194 (irf7b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    100329194 (irf7b)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100329194 (irf7b)
SSDB
Motif
Pfam: IRF-3 IRF OYE-like_second_a-b
Other DBs
NCBI-GeneID: 100329194
NCBI-ProteinID: NP_001165321
UniProt: D2SR00
LinkDB
Position
ssa10:complement(89470462..89473840)
AA seq 455 aa
MTEVRGSALTMQSRNPKPQFADWLIEQVWTGQYAGLYFVGNNKFRVPWNHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTLDLNQHTEEWAEN
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPIQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPLVQLHYQCDIPEPNAQTLCFPSTDGLLDHKQIEYTNRI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
DLIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEVAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPQHTMGQYF
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgacagaagtacgtggctcagcattaacgatgcaaagccgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtattttgtgggc
aacaacaagttcagagtcccgtggaaccacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgacccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacaggctacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccttagacctgaaccaacatactgaggagtgggcagagaac
tatatacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccaccaccagtcccagtaccaatacagcag
ccatacgaccacgttaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccctggttcagctccactaccagtgtgatatccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaaccgcatc
ctagggagcgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctccagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gatctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggagagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgaggtggcccagggggagggggcgtcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccacagcacaccatggggcagtacttctag

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