Salmo salar (Atlantic salmon): 100329194
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Entry
100329194 CDS
T04363
Symbol
irf7b
Name
(RefSeq) interferon regulatory factor 7B
KO
K09447
interferon regulatory factor 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa04623
Cytosolic DNA-sensing pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100329194 (irf7b)
04621 NOD-like receptor signaling pathway
100329194 (irf7b)
04622 RIG-I-like receptor signaling pathway
100329194 (irf7b)
04623 Cytosolic DNA-sensing pathway
100329194 (irf7b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100329194 (irf7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100329194 (irf7b)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100329194 (irf7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
100329194
NCBI-ProteinID:
NP_001165321
UniProt:
D2SR00
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All DBs
Position
ssa10:complement(89470462..89473840)
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AA seq
455 aa
AA seq
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MTEVRGSALTMQSRNPKPQFADWLIEQVWTGQYAGLYFVGNNKFRVPWNHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTLDLNQHTEEWAEN
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPIQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPLVQLHYQCDIPEPNAQTLCFPSTDGLLDHKQIEYTNRI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
DLIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEVAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPQHTMGQYF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtacgtggctcagcattaacgatgcaaagccgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtattttgtgggc
aacaacaagttcagagtcccgtggaaccacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgacccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacaggctacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccttagacctgaaccaacatactgaggagtgggcagagaac
tatatacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccaccaccagtcccagtaccaatacagcag
ccatacgaccacgttaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccctggttcagctccactaccagtgtgatatccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaaccgcatc
ctagggagcgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctccagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gatctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggagagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgaggtggcccagggggagggggcgtcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccacagcacaccatggggcagtacttctag
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