Salmo salar (Atlantic salmon): 100380282
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Entry
100380282 CDS
T04363
Symbol
gtf2e1, t2ea
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100380282 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100380282 (gtf2e1)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100380282 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
100380282 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
100380282
NCBI-ProteinID:
NP_001167038
UniProt:
C0H900
LinkDB
All DBs
Position
ssa21:17076306..17119373
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AA seq
454 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQRKQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNSG
DDAGGAQVGVAGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAARALTSSSAARGS
DSESDTSESDEDSPTAPPPVAAAQRRPTGMEMEEEEDDDEFEEVGDDESMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctttggacgtccttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcattccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgaccgggacgtttcgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacagatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagtcgggaccgt
gcggcggcggcggcgggtgcagcagctggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggag
gagcagcagcgcaagcaggccagcgaggggaaagcacctagggagagacccgtgtggctg
acagagagcactgtgcacggaggaacgtacagcgagccagacccactcaagaactccgga
gacgacgcgggaggagcccaggtgggcgtggccgggctcggaggtggccaatcggacgag
aacgaggaagtgatgcgcgccctgctcatccacgagaagaggagcggggccgggccggca
ggaggcggagccgtagcggcagccagggcactcacctcctcatcagcagccaggggcagc
gactcggagagcgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtg
gctgcggcccagcggcggccaacgggcatggagatggaggaggaggaggatgatgacgag
tttgaggaggtgggggacgatgagtccatggtgatggtgggggggcggtcgttctcctat
cgggaggtgagccagaggccagagctagtggagaagatgagctctcaggagaaagaggcc
tacatcgagatgggacagaacatcttccaggagatgtacttctga
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