Salmo salar (Atlantic salmon): 100380291
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Entry
100380291 CDS
T04363
Symbol
requ
Name
(RefSeq) Zinc finger protein ubi-d4
KO
K13196
zinc finger protein ubi-d4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100380291 (requ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100380291 (requ)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100380291 (requ)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100380291 (requ)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100380291 (requ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf_RING_Vps8
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PHD_4
Motif
Other DBs
NCBI-GeneID:
100380291
NCBI-ProteinID:
NP_001167047
UniProt:
C0H9G1
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All DBs
Position
ssa11:complement(76223865..76235169)
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AA seq
402 aa
AA seq
DB search
MAAVVENVVKLLGEQCYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRAPGVAPGQLYTYPSRRWRKKRRALPPEDPRLVFPPLKSELDLGFKKDALSSSDGSSLE
ALLKGEPLDKRGPPELQGPEEESSLADYTCGGVTPAARVRKRVLEPDDFLDDLEDEDYEE
DTPKRRGKGKGKGRGVSSAKKKLDAAAAAMEDKDKPYSCDICGKRYKNRPGLSYHYAHSH
LAEEEGGDKEEPEVHTPTPPQPEEPKTPKKGPDGLAIPNNYCDFCLGDSALNQKTGQSEE
LQSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRG
YHMYCLSPAMAEPPEGSWSCHLCLDLLKDKASIYQTPNAPPS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttgttgaaaatgttgtaaaactgctgggagagcagtgctacagagatgcc
atggagcagtgccataactacaacgcccggctatgtgccgagaggagtgtccgaatgccc
ttcctggactctcagactggagtggcgcagagcaactgttacatttggatggagaagaga
cacagggcaccaggagtggccccaggacagctgtacacctacccatcccgcaggtggagg
aagaaacgaagagccctccccccagaggatccccggctggtcttcccccctctaaagtca
gaactggacttgggttttaagaaggatgccctgtcatcatctgatggcagcagtctggaa
gccctgctgaagggggaacccctggacaagcggggtcctccggagctccaagggccagaa
gaggagtccagtctggcagactacacttgtgggggagtcacccctgcagcacgcgtcaga
aagagagtcctggagccagatgacttcctggatgacttggaggatgaggactatgaggag
gacacccccaaaagaagaggcaaaggaaagggaaagggtcgtggagtgagcagtgccaag
aagaagctggatgctgcggcggctgcaatggaggacaaggacaagccttactcctgtgac
atctgtgggaagcgttacaagaaccgtccgggcctgagctaccactacgcccactcccac
ctggctgaggaggagggcggggacaaggaggagcctgaggtccacacccccaccccgccc
cagcctgaggagcccaagacacccaagaaaggtccagatggtttagcgatacccaataac
tactgtgacttctgcctgggagactcagccctcaaccagaagacgggccagtcagaggag
ctgcagtcctgctcagactgtggacgttcaggccacccgtcctgcctgcagttcacccct
gtgatgatggctgcagtgaagacctaccgttggcagtgcatcgagtgcaagtgctgcaac
atctgtggcacctcagagaacgacgaccagcttctcttctgtgatgactgtgatagaggc
tatcacatgtactgtctcagccctgctatggctgaacctccagaagggagctggagctgc
catctgtgtctggacctgttgaaagacaaggcgtcaatataccagacacctaatgcccct
ccatcgtga
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