Salmo salar (Atlantic salmon): 100380326
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Entry
100380326 CDS
T04363
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette, sub-family F (GCN20), member 1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sasa03012
]
100380326 (abcf1)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100380326 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_18
AAA_28
AAA_29
ABC_tran_Xtn
AAA_16
AAA_14
AAA_22
AAA
RsgA_GTPase
NACHT
AAA_24
AAA_5
MMR_HSR1
cobW
AAA_23
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
100380326
NCBI-ProteinID:
NP_001167082
UniProt:
C0H9P3
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All DBs
Position
ssa27:complement(21531957..21563384)
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AA seq
854 aa
AA seq
DB search
MPKKAKEDAEWEGEEGAVAPSAVAEKSVKKGKKDKKGKKSFFDELATDNKTEKEDEPVLK
ETQGKQKKKKDRRKGRSGEGDDDDDDEDMMEKLKKLSVQASEDEEEEVSAPGKGKGNKGG
NIFAALSQGDSDDDGDDERLMNKEVEKVHKGKKKDKPKPKAKAPSDEEEKKDEDEKTAVK
KNRKPEAKPAPKATEEDEAEDEKPQPKKGKKEQPKRMNKPARPPRSEDEEGDDDEDDTMK
CAEDVIAEQEQEKGDDPFANMSKKEKKKKKKMIEYEKQVASVRAANAIEGDFSVSQAELS
SRQAMLENASDIKLERFSISAHGKELFVNADLLVVAGRRYGLVGPNGKGKTTLLKHIANR
ALSIPPNIDVLLCEQEVMADDTPAVQAVLKADTRRLKLLEEERQLQALLEKGEDSVAERL
DKVYEELRIIGAAAAEAKARRILAGLSFTPEMQNRATKKFSGGWRMRVSLARALFMEPTL
LMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDDVCTDIVHLDNQKLYYYRGN
YLTFKKMYVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKEALTRKQAKGKKKGGV
EEESQEATELLKRPKEYTVKFTFPNPPSLSPPILGLHSVDFAFEGHKPLFKNVDFGIDME
TRICIVGPNGVGKSTLLLLLTGRLNPSKGEMRKNHRLKVGFFNQQYADQLNMEEAATEYL
QRNFNLPYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELACRQPDVLILDEPTN
NLDIESIDALSEAINEYKGAVIIVSHDARLITETACQLWVVEDRSVNQIDGDFEDYKREV
LESLGETLVHKVKE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaagcgaaagaagacgcagaatgggaaggagaagagggagcagtagcacca
tcagcggtggcagaaaaatcagtaaagaaaggaaagaaggataagaaggggaagaagagt
ttctttgatgagttggccacagataacaaaactgagaaggaggatgaacctgtgctgaaa
gagactcaaggaaagcagaagaaaaagaaagaccggcggaaaggtagaagtggcgaggga
gacgatgatgatgatgacgaggatatgatggagaaactgaagaagctgtcagtgcaagcc
agcgaggacgaggaagaggaagtttcggcccctggaaaaggcaagggaaataagggtggg
aacatctttgcagctctcagtcagggagacagtgatgatgatggtgatgatgagagactg
atgaataaggaggttgagaaggtgcataagggcaagaaaaaagataagccaaaaccgaaa
gccaaggctccctctgatgaggaagaaaagaaagacgaggatgaaaagacagctgtgaaa
aagaacaggaaaccagaggctaaaccagcacccaaggcaactgaggaggatgaagcggag
gacgagaagcctcagccaaagaaaggcaagaaggaacagcccaagaggatgaacaaacct
gctcgccctccgcgcagcgaagatgaagagggtgatgacgatgaagatgacacaatgaag
tgtgctgaagacgtgatagcagagcaggagcaggagaaaggtgacgacccctttgccaac
atgagcaagaaggagaagaagaagaaaaagaaaatgattgagtatgagaagcaggtagcc
agtgtgcgtgctgccaacgccattgagggtgacttctccgtgtcccaggctgagttgtct
tccaggcaggccatgctggagaacgcatcagatatcaagctggagaggttcagtatatca
gctcacgggaaagagctgtttgtcaatgcagacctcctggtggtggcaggaagacgctac
ggtctggttggacctaacgggaaggggaagaccacgcttctgaaacatattgccaacaga
gctctcagtatccctcctaacatcgacgtgctgctctgtgagcaagaggtgatggcggat
gacaccccagcggtccaggctgtgttgaaggcagacaccaggcgtttgaagctcctagag
gaggagagacagttgcaggctctgctggagaaaggagaagacagtgtggctgagagactg
gacaaggtctatgaggagttgaggatcatcggggcagcagcagcggaggctaaagcccgt
cgtatcctggctggtctctccttcaccccagagatgcagaacagagctaccaagaagttc
tctggaggctggaggatgagagtctcactagccagagctctgttcatggagcccaccctg
ctgatgctggatgagcccaccaaccatcttgacctcaacgctgtcatctggctcaacaac
taccttcagggctggaagaagactctcctcatcgtgtctcacgaccagagtttcctggac
gatgtgtgtactgacatagttcacttggacaaccagaaactttactactacagagggaat
tacctgacgtttaagaagatgtacgttcagaagcagaaggagctccagaaacagtacgac
aaacaggagaagaagctcaaagatctcaaggctggagggaagtccaccaaacaggccgag
aagcagactaaggaagccttgaccaggaagcaagcgaagggaaagaagaagggaggagtg
gaggaggagagtcaggaagctacagagttgctcaaacgacccaaagagtacactgtcaaa
ttcaccttccccaaccccccttctctctctcctcccatcctcggactgcacagtgtagac
tttgcctttgagggacacaaacccctcttcaagaatgtggactttggtatcgacatggag
actagaatttgtatagttggacccaatggagtcgggaagagtaccctattactacttctc
acgggcaggttaaatccatccaagggggagatgagaaagaaccatcggttgaaggtgggc
ttcttcaaccagcagtatgctgaccagctgaacatggaggaggcagctacagagtacctc
cagaggaacttcaacctgccctaccaggacagcaggaagtgtctgggccgcttcggactg
gagagccacgcacacaccatccagatctccaagctatcaggtggtcagaaagccagagtg
gtgtttgctgagctggcctgtcggcaacctgacgttctcatcctggatgagcctactaac
aacctggacattgagtcgatcgatgccttatcagaagctatcaacgagtacaaaggagcg
gtgatcattgtgagtcacgatgcccggctgatcactgagacagcctgtcagctgtgggtg
gtggaggaccggtccgtcaaccagatagacggagactttgaggactacaaacgggaggtc
ctggaatcactgggggagaccctggtccacaaggtcaaggagtga
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integrated database retrieval system
