Salmo salar (Atlantic salmon): 100380333
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Entry
100380333 CDS
T04363
Symbol
gle1
Name
(RefSeq) GLE1, RNA export mediator
KO
K18723
nucleoporin GLE1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100380333 (gle1)
03015 mRNA surveillance pathway
100380333 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100380333 (gle1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100380333 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
100380333
NCBI-ProteinID:
NP_001167089
UniProt:
C0H9R7
LinkDB
All DBs
Position
ssa20:18575655..18583684
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AA seq
721 aa
AA seq
DB search
MPAESLRWDTLEALKNSQKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASRDPGLSEEAPVSSTSPFPSANTQPTPLSSPLLVPRLKKDTEQQIVGD
EDSAPDASDDLSPATNPIPPPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQELQE
KLVASVASRESEQLKRFEELMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHKNRIKI
LNLRLREAEQQRLREVEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPSPD
LTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQEK
RKKEQEEEEERRKMAMLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQDSA
NQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGRSV
VSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPKVG
DLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIRLY
AAIIQLRWPYGSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMKQY
QVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHFWR
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacgttggaggccttgaaaaactcacaaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctctttgggctctgcttctcgtgacccaggcctgtctgag
gaagccccagtctcctcaaccagccccttcccttcagccaatactcagcccactcccctc
tcttctccactactggtccccaggttgaagaaagacacagagcagcagattgttggtgat
gaggacagtgccccagatgccagcgacgatctcagtccagccaccaaccccattcctccc
cccaccatctcccttctgtctcccagggcaactcaaatggaaggatgtatacgcatttgt
gaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctgcaggag
aagctggtggcctcagttgcgagccgtgagtcggagcagctcaaacgctttgaggagttg
atggagctgaagcagagacaggagtaccagagtatgagggacatgatggacagagaaaca
caagaaagtattgggcgccaagaaaagttgaaagaagagcacaaaaacagaataaagatc
ctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggtggaatttgagagg
cagagacaggtggagggtagggagagactgcgtgctctcaacgccatccaggaagagata
cttcaactcaatcagctgctggagccagccgcacccacccagtcgggcccctcccctgat
ctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtggtgcgc
atgacagcggagggggagttccccagtgtggaggacatgacggtggcggagcgggcactg
catgagatgaggtcactgatccgggtgatgcaggaggcggctgcccaggcccaggagaag
aggaagaaggagcaggaggaggaagaggagcgcaggaagatggcaatgctgcaggcccag
caggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaaaagggc
ctgcagactaaagctgagcagagcactctgaagtggtaccaagagctgcaggactccgct
aaccagtgtgcacagtcttttgaaggcttgaacaacactaaggatatccagacaaagaaa
ctaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagtatctca
ggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggagatcagtg
gtatccggagggaagtctgtctccacctcccagcatcccaacggcctggactttgtcagc
tacaaactggcagagaagtttgtgaaacaaggagaagaggaggtggcgtcccaccacgag
gcagccttccccatcgctgtggtggcctccggggtgtgggagcttcatcccaaagtcgga
gacctcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactacccacct
atgaaggatggcacgtctgtagaggaatatcagaaaatcttaggctaccgtgtggaagat
ggaggagtggaggctcaggacagctttttgaagaggatgtcaggaatgatccgcctctat
gctgctatcattcagctcagatggccttatggctccaagcaggggcctgacccacatggg
ctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggcagacgtc
acggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgaagcagtat
caggttcagttttggaagctcattctgctcatccaagaggaatacttgccacggattgaa
gccgtcaccagccaaggccaggcgggctcagtcacgaggctcaagcagttcctggagagt
tcattaagaagcaggcagatccctccccctaaaggccagctgagctcccacttctggaga
tcctga
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