Salmo salar (Atlantic salmon): 100380420
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Entry
100380420 CDS
T04363
Symbol
ube4b
Name
(RefSeq) ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100380420 (ube4b)
04120 Ubiquitin mediated proteolysis
100380420 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
100380420 (ube4b)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100380420 (ube4b)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
U-box type E3
100380420 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
UBA_At5g58720
Motif
Other DBs
NCBI-GeneID:
100380420
NCBI-ProteinID:
NP_001167175
UniProt:
C0HAB9
LinkDB
All DBs
Position
ssa13:31521091..31614305
Genome browser
AA seq
1179 aa
AA seq
DB search
MELSADEIRRRRLARLAGGQTSQPSTPLTSPQRETPPGPLPETSGATPQPFPPAASHTLG
LNVQSVTPATSPMGASGVAYCSQSSEGVSSLSSSPSNSLETQSLSRSQSMDIDTASCEKS
IISQVDVDSGIENMDVEDSDRRERRNLAEKESAETSDVSEEQALQLICKILRVSWKEQDR
DVIFLPSLATEFHQNSPKDVYSDFKDLIGQILMEVLMMSTMSHIHNPFASLTTTSQPIAA
AKSPDHHLRLVQPSSQGGSPMATCAGSFGASSLSSLGVSAGGMDSQSCNDCFSIEACMET
EMLNYLIERFDSVSMEESKAPKICSHPRVSQLLSNIRSQCISHATLVLQGALTQPRSPLQ
QSLLVPYMLCRNLPCGFIQELARMTHQEEVFRQIFVPVLQGLALAVKECSFDSDNFKFPL
MALAELCEIKFGKTHPICNLMTSLPLWCPKSLGPGMGREAQRLSFLGAFFSLSVFAEDDT
KVGDKYFSGPAITMENTRVGSQTLQHYLESARCDLFKILHNILLNGETREVALNYMAALV
NRNVKKAQMQTDDKLVSTDGFMINFLSVLQQLSMKIKLETVDPYYIFHPRCRLQVSREET
RLKATMEELKTWLAEIHDDPSKFYNPKFPTECFFLTLHTHHLSILPGCRRYIRRLRAIRE
LNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQ
FYSMVIQLILRMVDPAYPHVTLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYSPQVLYE
PCVQNIVTFLVVFICSQNYIRNPYLIAKLVEILFVTNPAVQPRTQCFSEMMENHPLSVKH
LVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNMGHHGTFLEEFNSGKQFVR
YINMLINDTTFLLDESLESLKRIHEVQEEVKNKEQWDQLPREQQQSRQSQLTQDERVSRS
YLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYG
FEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMKKAGIKSTITIEKFK
LLSDKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRAIILRHLLNS
PTDPFNRQPLNESMLESLPELKERIQAWMREKQGQGRFL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagtgccgacgagatccgcaggaggagactggccagactggcaggaggacaa
acatcccagcccagcactcccctgacatccccacagagagagaccccccctgggcccctt
cctgagacctcaggggccacaccccagccctttccaccagctgcctcacacacactggga
ctcaatgtccagagtgtcacccccgccacctctcctatgggcgcctctggtgtggcgtac
tgcagtcagagcagcgagggtgtgagctccctctccagctctccctccaacagcctggag
acccagagtctgtccagatctcagagcatggacatcgacactgcctcctgtgaaaagagc
atcatatcccaagtcgatgtggactcagggatagagaacatggatgtggaggacagtgac
cgcagggagaggaggaacctggctgaaaaggaatccgctgaaacctcagatgtctctgaa
gagcaggctctgcagctcatctgtaagatcctgcgtgtctcctggaaggagcaagacaga
gatgtcatctttctcccctcgcttgccacagagttccaccagaacagccccaaagacgtc
tactctgacttcaaagacctgattggccagatcctgatggaggttctcatgatgtccacc
atgtcccacatccacaaccccttcgccagcctgactaccacgtcccagccaattgctgct
gctaaatctcccgaccaccacctgaggctggttcagccctctagccagggcggtagtccc
atggccacctgtgcaggctcatttggggccagctctctgtccagtctgggtgtgtctgca
gggggaatggactcgcaatcctgcaacgactgcttctccatcgaggcgtgcatggagact
gagatgctcaactacctcatcgagcgcttcgacagtgtaagcatggaggaaagtaaggcg
ccaaagatttgcagccaccccagggtcagccagctcctcagcaacatacgctcacagtgc
atttcccacgccactcttgtccttcagggcgccctcacgcagcccaggagccccctgcag
cagtccctgctggtgccctacatgctgtgccgaaacctgccgtgtggctttatccaggag
ctggcccgcatgacccaccaggaggaggtcttcagacagatctttgttccagtccttcaa
gggctggctctggctgtgaaagaatgttccttcgacagtgacaactttaaattccccctc
atggccttagctgagctctgtgagataaagtttgggaagactcaccccatttgcaatttg
atgacatctctgcccctgtggtgtcccaagtctctgggcccggggatgggccgagaggct
cagagactgtccttcctgggagcattcttcagtctgtcggtctttgcagaggatgacacc
aaagtgggtgacaagtacttctcaggcccagccatcaccatggagaacactcgcgtgggt
agccaaaccctgcagcactacctggagtcagcccggtgtgacttgtttaaaattctccac
aacatcctattaaatggagagacaagagaggtagcgctcaactacatggcagctctggtc
aaccgcaatgtgaagaaagcccagatgcagacggacgacaagctggtgtccacggacggc
ttcatgattaacttcctgtcggtgctgcaacagctgagcatgaagatcaagctggagacg
gtagacccgtactacattttccacccccgctgccgcctgcaggtcagccgtgaggagacc
cggctcaaggccaccatggaagagctcaagacctggctggccgagatacatgatgaccct
tccaagttctataatcccaagttccccacagagtgtttctttctgacgttgcacacccac
cacctgtccatcctaccaggctgccgacgctacatccgcaggctgagagccattcgcgag
ctcaacaggacggtggaagagctgaagaatagtgagagccagtggaaggactctccgctg
gccagccgacaccgagagatgctgaagagatgcaaaacccagctcaagaaactggtgcgc
tccaaagcctgtgccgatgcgggtcttctggacgagaacctgttacgcagatgtctgcag
ttctacagtatggtcattcagctcatcctacgcatggtggatcctgcctacccacacgta
actctaccactgaatcccgagatcccaaaaagctttgctgctctgccagagttttacatt
gaagatgtggccgagttcctgctttttgttgtgcagtattcccctcaggttctgtatgag
ccctgcgtccagaacattgttaccttcctggtggtgttcatctgcagtcagaactacatc
cggaacccctacctgatcgccaagctggtggagattctgtttgtcaccaacccagctgtg
cagccgcgcacccagtgcttctctgagatgatggagaaccatccactgtccgtcaaacat
ttggtcccggccctcatgaagttctacactgacgtggagcacaccggtgccaccagcgag
ttctatgacaagttcaccatccgctaccacatcagcaccatcttcaagagcctctggcag
aacatgggccaccatggcactttcctggaagagttcaactccgggaaacagtttgtgcgt
tacatcaacatgctgatcaacgacaccacctttctgctggacgagagcctggagtccctg
aagcgcatccatgaggtccaggaggaggttaaaaacaaggagcagtgggatcagcttccc
agggagcagcagcagagccgccagtcccagttgacccaggatgagcgggtgtcacgctcc
tacctggccctggctacagagacggtcgacatgttccacatcctcaccaagcaggtccag
aagcccttcctccggcccgagttggggcctcgtctggcggccatgctgaactttaacctc
cagcagctatgcgggcccaagtgccgggacctgaaggtggagaacccagagaagtacggt
tttgagcccaaaaagctcctagaccagcttactgacatttacctgcaacttgactgtgcc
cgcttcgccaaggccatcgccgacgaccagcggtcatacagccgagagctctttgaggaa
gtgatttccaagatgaagaaagccgggatcaagtccaccatcaccattgaaaaattcaag
ctgctatcggataaggtggaggagatagtcgccaggaactctcagtccgaaatggactac
agtgacgcacctgacgagtttaaagaccctctgatggacacattaatgactgaccctgtg
atactgccctctgggaacatcatggaccgagccatcatcctccgccaccttctcaactcc
ccaactgacccatttaacagacagcctctcaacgaaagcatgctggagtcactccctgaa
ctgaaggagaggatccaggcatggatgagagagaagcaaggccagggacgtttcctctag
DBGET
integrated database retrieval system
