Salmo salar (Atlantic salmon): 100380476 Help Entry 100380476         CDS       T04363                                  Symbol ift88 Name (RefSeq) intraflagellar transport 88   KO K16474   intraflagellar transport protein 88 Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sasa03037]     100380476 (ift88) Cilium and associated proteins [BR:sasa03037]  Primary cilia and associated proteins   Intraflagellar transport (IFT) complex B1    100380476 (ift88) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_1 TPR_12 TPR_8 TPR_6 TPR_19 TPR_14 TPR_16 TPR_7 TPR_11 ANAPC3 TPR_9 ARM_TT21_5th SNAP TPR_10 TPR_17 TPR_CcmH_CycH TPR-S ARM_TT21_4th MIT ARM_TT21_N TPR_15 RPN7 Coatomer_E ARM_TT21 ARM_TT21_2nd HAT_PRP39_C SHPRH_helical-1st DUF6584 ARM_TT21_C RNPP_C SPO22 Motif Other DBs NCBI-GeneID:  100380476 NCBI-ProteinID:  NP_001167232 UniProt:  C0HAT2 LinkDB All DBs Position ssa25:31056927..31087141 Genome browser AA seq 845 aa AA seqDB search MEHVHLAAEEDDLYSGYNDYNPTFDSEELDNDAGFQQAVRTSHGRRPPMTAKFPGTAIGG RALGTSFGSRMPMASSMGRPMTGAVQDGAARPMTAVRAAGYSSAMTRGSTFDPLGQSKGP APPLEGKSEDTPDEKVKILEKKVNDLIEESCLAHGHGDLQLSLDRAKEAGRKERALVRQR EQSGNADHINLDLTYSVLFNLATQYANNDMYAEALNTYQVIVKNKMFSNAGRLKVNMANI HFKQKNYPKAIKLYRMALDQISNSHKEMRIKIMQNIGVVFIRMGQYSDAITSFEHIMSES PNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGIDEEDKYIPPNDDTHANLVIEAIKN DKLHQMERERKALAEKFIMTSAKLIAPAIEATFAAGFDWCVDMVKSSQYVELANDLEINK AITYLRQRDFKQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMTADR YNPAALINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEESLDCF LKLHAILRNSAQVMWQLANLFEMLEDPHQAIEWLMQLITVTPTDPQVLAKLGELYDSEGD KSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLMVA SCYRRSGNYQKALETYKDIHRKFPENIECLRFLVRLCTDMGMKEVQDYATKLKKVEKMKE IREQRVKSAREGSARGTRREGSASSEVDIKAVSHPEPKHSPLLDQGRDSGHSSHGTSAKG ERLSAKMRALPGSNEPYEASSQRDIDASYVDPLGAPMERPKTAAKKRNEDDDFADEELGD DLLPE NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt atggaacacgtacatcttgctgctgaggaagatgacctgtactctggctacaacgactac aatccaacatttgattcagaggagcttgacaatgatgctggttttcagcaagcagtcagg acaagccatgggagaaggccccccatgactgccaagtttcctggcactgccattggagga cgggctttggggacctcttttggatctaggatgcccatggcctcatctatgggcagaccc atgactggagctgtacaggatggagcagctaggcctatgactgcagtcagagcagcaggc tattcttcagccatgaccagagggtcgacatttgacccactaggtcagtccaaaggaccg gctcctccattggagggcaaaagtgaagatacgccggatgagaaggtgaagatcctggag aagaaggtgaacgacctgatagaagagagctgcctggcgcacggccatggagacctgcag ttgtcccttgatagagccaaagaggcagggcggaaggagagagcgctggtgagacagagg gagcagtcaggcaatgcagaccacatcaacctggacctcacatactctgtcttgtttaac ttggcaactcagtacgccaacaatgacatgtacgcggaggccctgaacacttaccaggtc atcgtaaagaacaagatgttcagtaatgcaggaaggttaaaagtgaacatggccaacatc catttcaagcagaaaaactaccccaaggccatcaagttgtaccgcatggccctggaccag atctccaactcccacaaggagatgaggatcaagatcatgcagaacatcggtgtggtcttc atccgcatgggccagtactctgacgccatcacctcctttgaacacatcatgagcgagagc cccaacattaagacaggctttaacctgatcctgtgttactacgccatcggagaccgagag aggatgaagaaggcctttcagaagctcatctgtgttcctctggggatcgacgaggaggac aagtacatcccacccaatgatgacacccatgccaacctggttattgaagccatcaagaac gacaagcttcaccagatggagagagaacgtaaagccctggctgagaaattcatcatgaca tcagccaagctcatcgccccagccatcgaggcgacgttcgccgccggatttgactggtgt gtggacatggtgaagagttcccagtacgtagaactggccaacgacctagaaatcaacaaa gccatcacctacctgagacagagggacttcaaacaggctgtggagactctgaagacgttt gagaagaaagacagcagagtgaagagtgctgcagccactaacctctccttcctctacttc ctggagaaagactacgaccaggctgaccgctatgccgacttggccatgacagccgaccgc tacaacccagcggcgctcatcaacaagggcaacacggtgtttgtgaagaaggactatgag aaggctgcagagttctacaaggaggctctccggaacgactcgtcctgcactgaggcccta tataacctaggtcttacctataagcgtctgggccgtctggaggagtctctggactgtttc ctgaagctccacgccatcctgaggaacagcgcccaggtcatgtggcagctagccaacctc tttgagatgttggaggatccccaccaggccatagagtggttgatgcaactgatcactgtg acgcccacagacccccaggtgttggccaaactgggagagctctacgacagcgagggagac aagtctcaggcgttccagtactaccaagagtccttcagatatttcccctccaacattgac gttattgagtggctgggggcctactacattgacactcagttctgtgagaaggccatccag tactttgagagagccacactaatccagccaactcaggtgaaatggcagcttatggtcgcc agctgctacagaagaagtggaaactaccagaaagccctggagacttacaaagacatccat cggaaattcccggaaaacattgaatgcctgcgtttcctggtgaggctgtgcacagacatg gggatgaaagaggtccaggactacgccaccaaactgaagaaggtggagaagatgaaagaa atcagagaacagcgggtgaagtcggcgagggagggcagcgctagaggcacccggagagag ggtagcgccagcagtgaggtggatatcaaagcagtctctcaccctgagcctaaacacagt cctctgctggaccaggggagagacagtggacacagcagccatggcaccagcgccaagggg gagaggctgagcgccaagatgagggcactgcctggctccaacgaaccctacgaggccagc agccagcgagacatagatgcctcctacgtggatccactgggggctccgatggagagacca aagactgcagctaagaagcgcaatgaagatgatgactttgctgatgaagagctgggagat gacctactaccggagtag

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