Salmo salar (Atlantic salmon): 100380495
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Entry
100380495 CDS
T04363
Symbol
vps36
Name
(RefSeq) vacuolar protein sorting 36 homolog
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100380495 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100380495 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100380495 (vps36)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100380495 (vps36)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100380495 (vps36)
Exosomal proteins of colorectal cancer cells
100380495 (vps36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
100380495
NCBI-ProteinID:
NP_001167251
UniProt:
C0HAY1
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All DBs
Position
ssa11:complement(91920562..91954336)
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AA seq
386 aa
AA seq
DB search
MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIVLLSTHQLIWRDLKNHECCIA
IPLSQIIYFEEQAAGIGKSAKIVVHLHASPANKEPGPYQQSKFSYFKLSFKEHGQIEFFR
RLTEELSQKRWESTPMSQPIPTATNSQTGRTRAVGIVGIERKIEERRKETEKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDILLAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKLFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMISSALDNVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFNSQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacattggtgattcaa
caacgaggtgttaaactttatgacggagaagacaaggccaagttggatgttggaattgtt
ctgctgagtactcaccagttaatatggagggacctgaagaatcatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagtgcc
aagatagtggtccacctgcacgcttccccggccaataaggagccaggaccctaccagcag
agcaagttctcctacttcaaactgtccttcaaagagcatggacagatagagttcttccga
aggctgaccgaggagttgagccagaagagatgggagagtacgcccatgtcacaacccatc
cctacggcaaccaactcacagacaggaaggacgcgagcggtgggcatcgtcggcatcgag
aggaagatagaggagaggaggaaagagacagagaaaaacatctcagaggcctttgaggac
ctcagtaagctgatggtgaaggctaaggagatggtggagctgtccaggtccatcgccaac
aaaatcaaagacaagcagggagacatcacagaggacgagactatccggttcaaatcctac
ctgctcagtatgggtatagccaaccccgttaccagggagacgcacggctcgggtacccac
taccacctccagctggccaagcagctgggagacattctgctggcaccgctagaggagcgt
ggtgggatgatggctctaactgaagtgtactgtctggtaaaccgagctaggggtatggag
ctgctgtctccagaggatttggtgaatgcctgtaagctgtttgagtcgctgaagctacca
ctgaggttgcgtgtcttcgacagtggtgtgatggtggttcagctgcagtcccacagtgag
gaggagatgatctcctcggccctggacaacgtaactgataaaggctctctgacagctgag
gagtttgccaagctgctcggtctctctgttcttctgtctaaagaaaggttgttactagca
gagaagatgggtcacctgtgtagagacgactctgtggaaggactacggttctacccgaac
cttttcaacagtcaggcttga
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