Salmo salar (Atlantic salmon): 100380516
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Entry
100380516 CDS
T04363
Symbol
taf6l
Name
(RefSeq) TATA-box binding protein associated factor 6 like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100380516 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100380516 (taf6l)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100380516 (taf6l)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100380516 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
100380516 (taf6l)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100380516 (taf6l)
STAGA complex
100380516 (taf6l)
TFTC complex
100380516 (taf6l)
SAGA complex
100380516 (taf6l)
SLIK complex
100380516 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
100380516
NCBI-ProteinID:
NP_001167272
UniProt:
C0HB28
LinkDB
All DBs
Position
ssa18:complement(46003313..46010327)
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AA seq
637 aa
AA seq
DB search
MEERRFAEVPRESVKLMAESAGVELSDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKL
TVEDFNRALRWSNVEAIAGYGAQDALPFRPIKEGELFFVDDRDINLVELALATNIPKGCA
ETMVRVNVSYLDGKGNLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVALLDL
QSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVM
YCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRP
LCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAIL
VAVERLLKMKALSLSQPAEGSSSAQPGSGGVMGFRVSSPGLSPPPEPLSEAALGIASHLQ
GPGGAGTPWDDWTPVPLPAMYCELYSFFGDSLAVRFSTGPSLGGCPPSAPSQPPDTRKEP
PGPAGNPDTTRKMPQLTANLNISPRQDGSPRTEPAPPSLAATAPGRSLARSSSSSSIQRR
NSSSRPGQRSAGPSRDVFTKARFPPPQTGPPTFSFLIGGRQMGRRCQGRRFQTSFSSPPP
LSTVPPRAYAHKLPVIGRVGKPVRRWTCSHYSLHLPL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcgctttgctgaagtccccagagagtctgtcaaactcatggctgagagt
gcgggagtggaactcagtgacgatgtggctgcattgttggctgaagatgtctgctaccgg
cttagggaagccacacagagcagctctcagttcatgagacatgccaagaggaggaagctg
acagtagaggacttcaacagagcactgcgctggagcaatgtggaggccatagctggctac
ggtgcgcaagatgccctacctttccgaccgatcaaggagggcgagctgttctttgtggat
gaccgtgatatcaacctggttgaacttgccctggccaccaacatacccaagggctgtgcc
gagaccatggtgcgagtgaatgtatcttatctggatgggaaaggcaacctagagcctcaa
ggtacagttcccagtgctgtacaaactctctcggaggatctgctcaagtactaccagcag
atcacccgggccatactaggagaggacccacaccttatgaaggtggctttgctggatctc
cagtccaactccaagattgctgccctcctgccgtattttgtatacgtcatcagtggggtg
aagtctgtgagccacgacctggagcagctgaaccgtctgctgcacatggtgaagagtctg
gtgcagaacccctacctgtaccttggatcctacgtgcgcagcctggtgtccagcgtcatg
tactgcatcctggagccgctggccgcctccatcaaccccctcaacgaccactggacctta
agggactacgcagcactgctgctcagccacatcttctggacccatggagacctggtcagt
ggtctgtaccatcagattctgctgtctctgcagaaggttctgtcagacccggtccgcccg
ctgtgttctcactacggagctgtcgtggggctacacgcactcggatggaaggctgttgag
cgggtgttatatccacacctgccagcctactgggctaacctgcaagctgtcctggatgat
tactcagtctccaacgcccaggtgaaagcagacggacacaaggtctacggagccatcctg
gtggcggtggagcgcctgctgaagatgaaagccctgtctctgtcccagccagcggagggg
agcagcagcgcccagcctggctctgggggagtgatgggtttcagggtgagttcccccggg
ctcagcccccctccagagcccctctccgaggccgccctgggcatcgccagccacctgcag
ggacctgggggggctggcaccccctgggatgactggacccccgtccctctgcccgccatg
tactgtgagctctactccttcttcggcgacagcctggcggtacgcttcagcacaggcccc
agcttgggaggttgccccccgtcagccccctcccagccccctgatacgaggaaggagccc
cctggtcccgctggcaacccagacaccacgcgcaagatgccccagctcactgctaacctc
aacatcagccctcggcaagacgggagccctcgcactgagcccgccccacccagtctagct
gccactgctccaggaaggtccctggctcgctcttcctcctcatcctccatccagcgcaga
aactcctcctcccggccgggacagcgctcagcgggtccatcccgcgatgtgttcaccaag
gcccgtttcccccctcctcagaccggaccccccacattctccttcctcatcgggggacgt
cagatgggccggcgctgccaggggcgccgcttccagaccagcttcagctctcccccaccc
ctgtccactgtaccgccccgtgcctacgcccacaagctgcccgtcatcgggagggttggc
aaaccggtgcgccgctggacctgctcccactactccctgcacctgcccctctga
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