Salmo salar (Atlantic salmon): 100380524
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Entry
100380524 CDS
T04363
Symbol
ap5z1, k0415
Name
(RefSeq) adaptor related protein complex 5 zeta 1 subunit
KO
K19025
AP-5 complex subunit zeta-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100380524 (ap5z1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100380524 (ap5z1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
100380524 (ap5z1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
DUF3730
DUF7393
Motif
Other DBs
NCBI-GeneID:
100380524
NCBI-ProteinID:
NP_001167280
UniProt:
C0HB42
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MYSAGTESLIKQAREIGEVELQKFYGRITKQLAGKEHGHDVIDSLQRLHLIVASTKYTRR
LPVELHQRLLSFCVSSSVEQLTVLTSAVLRETLPPSGPEQIYTLHDYSPLTSQRNTAPSG
PEQIYTLHDYSPLTSHTAALVLSQAGSKEDLSALSSLLLRSLDGRPAGILSHLHTLPLLN
SIITYCPESLTEDHVTLLSKRLVDWLRYASVQQGGVASSGGFFTGPRIRQPGPVVELDGC
VCGDFFTVLCVSQAFSDDQWMNLYSFSLLRHWLITYHNVTDGNSSTDADDRSEVDGSVVS
MVSATSSSSRLLPPKERLREKSFEYCQRLIEQSDRKALKRADAELQKACLVEAVCILDGV
CVEDAGCVYRSFPCVKSLFGRLNSDLSCSRVLLPIAQFYLNHGEAAAVDGECVWRCVFGV
LPAECFNDPFLAHETLSFIRANRLQLRSSVPLYAHYFPNLLKFLAWDSPGLVSDYVDVLP
SLVTAGTAVELLHSLLDLPCLTAALILQLRSACFPVSEPGGRGLSSLEAFRSPAHRGLFL
FLLRGEAGSGDTMDRLSVLHDLLMEAADWSRVIQSAQSVPVLLHVYFNTVTTVSDERLLA
QLVLVLLERSSLLLNIPRYTAEIHRVFSHHLLKLCKLHPSLVVDQSRELLEFAGTTTNIN
SKEDLYTHVVWVLGEYLSVSFDSRCSVDLVTSCFETLEAVLFEITSSGSPSPRVVTSLLS
ALAKLASRSHDLIPRVSLFLSKLRSGAVSWCGSEEDVVAVVTRGEELWSLLKLPSVALSV
LTPPPPVATSPRWHGDANAALPQRLRALTGLTHTHTH
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagcaggaacagagagtttgatcaaacaagccagggagatcggggaggtggag
cttcagaagttctacggccggatcaccaagcagctggcgggtaaagaacacggccatgat
gtcatcgactcactccagagactacacctgatcgtggcctcaaccaagtacactaggagg
ctgccagtggagctgcatcaacgtctgctgtcgttttgtgtgtcttcctctgtggagcag
ctgactgtgttgacctcagcagtactcagagaaacactgcccccttctggtccggagcag
atctacaccctccatgactacagcccattaaccagtcagagaaacactgccccctctggt
ccggagcagatctacaccctccatgactacagcccattaaccagtcatactgctgcttta
gttctgtcacaggcggggtctaaagaagacctgtcagctctctcctctctcctcctgcga
agtttggatggacgaccagcaggcatcctgtctcaccttcacactctgcctcttctcaac
agcatcatcacctactgcccagagagccttactgaagatcatgtgaccctgctcagtaag
aggcttgttgattggctgcgctacgccagcgttcagcagggaggtgtggcttcgtcagga
gggtttttcactggccctcgaatacgtcagccggggccagtggtggagctggatggctgt
gtgtgtggggatttcttcacggtgctgtgtgtcagccaagccttctcagatgaccaatgg
atgaacctctacagtttctctctgctacgccattggctgatcacataccacaacgtaacg
gacggcaacagcagcacagacgcagacgacaggtcggaggtggacggctctgtggtttcc
atggtttcagccacctcgtcctccagcagactccttcctcctaaagaacgtctgagagag
aagagtttcgagtactgccaacgcctcatagaacagagtgaccgcaaggcgctgaagaga
gcagacgcagagctccagaaagcatgcctggtggaggccgtgtgtatcctggacggcgtg
tgtgtagaggacgctggttgtgtgtaccgttccttcccgtgtgtgaagtcgctgttcggc
cgtctgaactctgacctgtcctgcagccgagtcctcctgcccatcgctcagttctacctg
aaccacggcgaggctgcagcggtggacggtgagtgtgtgtggaggtgtgtgttcggagtt
ctcccggcggagtgtttcaacgacccctttctggcccacgagacgctgtccttcatcaga
gccaatcggctgcagctacgctcctccgtcccgctgtacgcccactacttccctaacctg
ctcaagttcctagcgtgggacagtccaggcctggtatctgactatgtggatgtgctgccc
tctctggtcacggctgggactgcagtggagctgctgcactctctactggacttgccctgt
ctcactgctgcgctcatccttcagctcaggtccgcttgcttccctgtgtctgagccagga
ggccgcggtctgtcgtcgctggaagctttccgaagccccgcccatagaggcctcttcctg
ttcctgttgagaggggaggcggggtctggtgataccatggacagactgagcgtgctccat
gacctgctgatggaggcagctgattggtccagagtcatccaatcagctcaaagtgttcca
gtgctgctgcacgtctacttcaacacagttaccacggtatcagatgagaggctgctggcc
cagctggtgttggtgctgctggagagaagcagcctgttgttgaacatccccagatacact
gcagagatacaccgagtttttagccaccacttgttgaagctgtgtaagctccacccctct
ctggttgttgaccaatcacgggagctgctggagtttgctggaaccaccactaacatcaac
agcaaagaagacctgtacacacatgtggtgtgggtactcggtgagtacctgtcggtgtca
tttgactctcggtgttctgtggatctggttacttcctgtttcgagacattggaggcagtc
ctcttcgagatcacttcctctggaagcccctcccctagggtggttacctccttactgagc
gcgctcgctaaactggcttcccgttcccatgacctcatacccagggtttctctgttcctc
tctaagcttcggagcggagcggtctcctggtgcggcagtgaggaggacgttgtcgccgta
gtgaccagaggggaggagttatggtcgctgctgaaacttccgagcgtggcgctgagtgtt
ctgaccccgcctcctcccgtcgccacttccccccgttggcacggagacgccaacgcagcg
ctgccacagagactcagagcactgactggcctcacacacacacacacacactaa
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