Salmo salar (Atlantic salmon): 100380527
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Entry
100380527 CDS
T04363
Symbol
atg5
Name
(RefSeq) ATG5 autophagy related 5 homolog (S. cerevisiae)
KO
K08339
autophagy-related protein 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
sasa04145
Phagocytosis
sasa04216
Ferroptosis
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100380527 (atg5)
04140 Autophagy - animal
100380527 (atg5)
04136 Autophagy - other
100380527 (atg5)
09143 Cell growth and death
04216 Ferroptosis
100380527 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100380527 (atg5)
04622 RIG-I-like receptor signaling pathway
100380527 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100380527 (atg5)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
100380527 (atg5)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100380527 (atg5)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100380527 (atg5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF8018
Hen1_L
Motif
Other DBs
NCBI-GeneID:
100380527
NCBI-ProteinID:
NP_001167283
UniProt:
C0HB55
A0A1S2X6V3
LinkDB
All DBs
Position
ssa05:complement(57764054..57796688)
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AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPTCFTLYQDEITEREAEPFYLLLPRVSYLTLVTDKVKKHFLKVM
KAEDVEEIWFDFEGTPLKWHYPIGLLFDLHASNTALPWSITVHFKNFPERDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYLTMSDRPFIQKLFRPISPDGHTHTLGDLLKEVYPVAISNDDESKRYQVVI
HGIEPLLETPLQWLSEHLSHPDNFLHISIIPAPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgctgcgagatgtttggtttggtcggattccgacctgcttc
acactttaccaggatgagatcaccgagagagaggccgaacccttctatctcctcctgcca
agggtgagctacctgactctggtcacagacaaggtgaaaaagcacttcctgaaggtcatg
aaggccgaagacgtagaggagatatggtttgatttcgaaggaacgccactcaaatggcac
tatccaatcggattgctgtttgacctgcatgcctccaacactgccctgccgtggagcatc
actgtgcactttaagaatttcccagagcgtgacttgctccactgcccctctaactctgtg
atcgaggcccacttcatgtccagcatcaaggaggcggatgccctcaaacacaagagccag
gtcatcaacgacatgcagaagaaagaccacaagcagctgtggatgggtctgcagaacgat
aagtttgaccagttctgggccatgaaccgtaagctgatggaataccccacagaggaggga
ggcttccgctacatccccttcaggatatacctgacgatgagtgacaggccgttcatccag
aagttgtttcgccccatctcgcccgacggccacacacacacgctgggggatctgctgaag
gaggtgtaccccgtggccatatccaatgacgacgagtccaagcgctaccaggtggtgatc
catgggattgagcccctgctggagaccccgttgcagtggctgagcgagcacctcagtcac
cctgataacttcctccacatcagcatcatacccgcgcctagcgactga
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integrated database retrieval system
