Salmo salar (Atlantic salmon): 100380544
Help
Entry
100380544 CDS
T04363
Symbol
tfip11, tfp11
Name
(RefSeq) tuftelin interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100380544 (tfip11)
Spliceosome [BR:
sasa03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100380544 (tfip11)
Other components
Complex C specific factors
100380544 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
100380544
NCBI-ProteinID:
NP_001167300
UniProt:
C0HBA0
LinkDB
All DBs
Position
ssa24:complement(15314675..15323409)
Genome browser
AA seq
841 aa
AA seq
DB search
MSMSHLYGRQGEEEDEGVEVEKFEVTEWDLANEFNPERRRHRQTKEEAVYGIWAERGDSD
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEEKQQQQIGGGSDDSDNDNTPPAQPPPRDT
APKKLQTGGHFRGNSQSQRTGFAAGIRAGGDLGTWEKHTKGIGQKLLQKMGYVPGKGLGK
NAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQRELGQWRRDPA
GGGGKKKPKYSYRTVEELKAKGKLAGRTTQTPAGELAQVKVIDMTGREQKVYYSYSQMTN
KLSVPEEAPLSVATREQKTSGFALPELEHNLQLLIDLTEQDILQSSRRLQHERDVVVTLS
HESSGLQTRLETERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAGVFETLQSEFYEE
YKTLGLGDLAAAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESDQLHHANAPEAHM
DPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWTPLLPLWILNHLLEQLLFPRLQR
EVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDGSARLILQP
WRDVFTPGAWEAFMVKNIIPKLALCLGELVINPHQQQMEPFNWVLDWEGMLSPSSLVSLL
DKHFFSKWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDAVLAQPLVKDKFNEALDIMNRA
VSSGLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRGIGASLPTNFKDL
IQTKAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMA
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtacggacggcagggagaggaggaggatgagggggtggaggtg
gagaagtttgaggtgacagaatgggacctggccaatgagtttaacccggagcgccgcaga
cacagacagaccaaagaggaggccgtctatggcatctgggcagagaggggagactccgac
gatgagagacccagcttcggagggaagaggtctaaggactactctgcccctgtgagtttt
gtgagtgctgggctgcgcaagtctgcagcagaggagaagcaacagcagcagataggtgga
gggtcagatgactctgacaatgacaacactccccctgcccaacccccaccccgcgacact
gcacctaagaaattacagacggggggtcatttccgtggcaacagccagtcccagaggact
gggtttgcggctggtatccgagctggaggagacttgggcacttgggagaaacacaccaag
gggattggccagaaactcctccagaagatgggctatgtaccagggaaaggactggggaag
aatgcccagggtattttgaaccccatcgaggcgaagcttcggaagggaaagggggcggtg
ggtgcctacggcaacgagagaaccaaacagtcactacaggacttccctgtggttgactct
gaggaggaggaggagaaggagttccagagggagctaggtcagtggcgtagggaccctgca
ggtggtggagggaagaagaaaccaaagtattcctacaggactgtagaggagctgaaggct
aaaggcaagctggctggacggaccacacagacacccgctggagaattggctcaggtcaag
gtgatagatatgacaggcagggaacagaaggtgtattacagctacagtcagatgactaac
aaactcagtgtaccagaggaggctccactgagcgtggccacacgtgagcagaagacgtct
ggctttgccctgccagagctggagcacaacctgcaactactgatcgacctgacggaacaa
gacatactacagtcctcgcggcgtctgcagcatgagcgtgatgtggtggtgactctgagc
cacgagagctccggtctgcagacgaggctcgagacggaacgggatgccatccagaggcta
gaggcagtactgcagctggtggatcgctttcagagcggggagactgcacctggggtagga
cccagcctgcaggagtgtgctggtgtttttgagactctacagagtgagttctatgaggag
tacaagactctaggtttgggagatctggctgcagctgtagtacatccactactcagagag
aaactacgtacatgggatcctctcaaggacagttcatatggtctggaggaggtgggtcag
tggcgagccatcctggagtctgatcagcttcaccacgccaacgcccctgaagcacacatg
gacccctaccacaggctgctgtgggaggtgtggatccccgtgctgcgagtgtgtgtgtcg
gggtggcagcctcgtatggtaggacccatggtggactgtgtggaggtctggacccctctg
ctgcccctctggatactaaaccacctcctggaacaactcctcttccccaggctgcagaga
gaggtggacagctggaaccccctgaccgacacagtgcccatccactcctggctccacccc
tggctgcctctgctccaatcacggctggagcctctctacccgcccatccgcagtaaactg
gccaatgcgctgcagcgctggcacccgagtgacggctccgcccgcctcatcctccaacca
tggagagacgtgttcacgcccggtgcctgggaggccttcatggtcaaaaacataatccct
aaactagctctgtgtctgggggagctggtaataaatcctcaccagcagcagatggagccg
ttcaactgggtgttggactgggagggcatgctgtctccctccagcctcgtatcactgctg
gacaaacacttcttctccaagtggctacaggtgctgtgttcgtggcttagtaacagtcct
aactatgaggagattacaaagtggtacctgggctggaagtccatattcagtgatgctgtt
ctggctcagccactcgttaaggacaagttcaacgaagctctggacatcatgaaccgcgct
gtctcctctggccttggtggagggtacatgcagcctggtgcccgtgagaacatagcatac
ctcacacacacagagcgtcgtaaagacttccagtacgaggctctgcaggagcgccgggac
gctgagagcgtggcgcagcgaggcatcggtgccagcctgcccaccaactttaaagacctg
atccagaccaaggctgaggagaacaacattgtcttcatgccgctggttgccaaacgccac
gagggcaaacagctgtacacctttggacgtatcgtcatctacatagacagaggagtggtc
ttcgtacagggagagaagacctgggtccccacgtccctacagagtctcatagatatggcc
aagtga
DBGET
integrated database retrieval system