Salmo salar (Atlantic salmon): 100380586
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Entry
100380586 CDS
T04363
Symbol
prpf31, prp31
Name
(RefSeq) pre-mRNA processing factor 31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100380586 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100380586 (prpf31)
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100380586 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
100380586
NCBI-ProteinID:
NP_001167342
UniProt:
C0HBK9
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All DBs
Position
ssa05:complement(69067239..69074139)
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AA seq
532 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPGEEGESDGEAGEGQVEGGLEDIPEEMEVDYSGAESV
SSIAKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELN
IIHKFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVS
VTASTTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLR
RKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVGSRSTVGGRSTVGGRSSVRDN
SSGTSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggctgtacccgggggaagagggggagagtgatggggaggcaggggagggacaggtagag
ggaggtttggaggacatcccagaggagatggaggtggactacagcggagctgagagtgtc
tcgtccattgctaaactacgcaacagcaaacagttctcagagatcatggacaaaattgca
atctatgtcgagaagcagcgcaagaactctgaagtctccggtccggtggaggcagaccca
gaatacaagctgatcgttgctgccaataacctcacagtagaaattgagaatgaactgaac
atcattcacaagtttgtacgtgacaagtattctaagaggttccctgagctggagtccctg
gtgcccaactctctggactacgtccgcactgtcaaggagctggggaacaacctggacaag
tgtaagaacaacgagaatctgcagcagatcctaaccaacgccaccatcatggtggtcagc
gtcacagcctccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggag
gaggcctgtgacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtg
gagtccaggatgtcgttcatcgctcctaatctgtcagtcatcgttggagcctcgactgca
gccaagatcatgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaac
ctgatgctactgggaacccagaagaggaccctgtcagggttcagcagcactgctgtgctc
ccacacaccggctacatctaccactgtgatgtggtccagactctacccccggacctgagg
agaaaggcagcacgtctggtttcagcgaagtgcaccctggcatcccgagtggacagcttc
cacgagagttcagacggcaaggtgggctatgacctgaaagaggagatcgagaagaagttt
gataaatggcaggagcctccaccggtgaagactgtcaaacccctgccagcaccgttggac
ggacagaggaagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctg
acagagatcaggaaacatgccaacaggatgaccttcgcagagattgaggatgatgcgtac
caggaggacctgggtttcagtctgggccagctggggaagtcgggcagcggacgtgtcaga
caggctcaggtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctg
cagaagcagaacatgacgtatggcggcaggtccacagtcggcggcaggtccacagtcggc
agcaggtccacagtcggcgggaggtccacagtcggcggaaggtcctcggtcagagacaac
tcctcaggaacaagttccagcgtagccttcactccactacagggactggagatcgtgaac
ccgcatgcagcagagaagaaggtggctgaagccaaccagaaatacttctccaacatggca
gagttcctcaaggtcaagaaggagggagagggaaagtga
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