Salmo salar (Atlantic salmon): 100380616
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Entry
100380616 CDS
T04363
Symbol
otp, otbp
Name
(RefSeq) orthopedia homeobox
KO
K24901
homeobox protein orthopedia
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100380616 (otp)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100380616 (otp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100380616
NCBI-ProteinID:
NP_001167372
UniProt:
C0HBT2
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All DBs
Position
ssa01:complement(135590078..135596273)
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AA seq
321 aa
AA seq
DB search
MLSHADLLDARLGMKDAAAELLGHREALKCRLGGGVGPDPGHSGELAPGPDTVEGTTMLP
GDDINNGGSNPSGVQANSKEQQDKQQQNNSSQSGGSQSQKQKRHRTRFTPAQLNELERSF
AKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTHHGLH
SQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQLPPALGRQHQHAMAQSLSQCS
LSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASLSGPTNVTSSPQLCSSPENDVWR
GTSIASLRRKALEHTVSMSFT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctcctggatgctcgcctcgggatgaaggatgccgcggcagag
ctgctgggtcacagggaggctctgaagtgcaggctaggtggtggagttggacctgacccc
ggccactccggcgagctagccccggggccagacaccgtggaggggaccaccatgctccct
ggagacgatatcaacaatggtgggtccaacccttccggcgtgcaggccaacagtaaagag
caacaggacaagcagcagcagaataactccagccaatccggaggaagtcagagtcagaaa
cagaagcgacaccggacccgattcaccccagcccaacttaacgaactggagcgcagcttc
gccaaaacgcactacccagatatcttcatgagggaggaactggccctacggatcggccta
acggaatctcgcgttcaggtttggttccagaaccgacgcgccaagtggaagaagcgcaag
aagaccaccaacgttttccgcgctccgggaacgctgctgcccacccaccacggcctgcac
agtcagttcaactctgctgctgccgccgccgcggccatgggcgacagcctgtgctccttc
cacgccaacgacacccgctgggccacggcagggatgccaggcgtctctcagctgcagctc
cctccagccctgggtcgccagcaccagcatgccatggcgcagtccctgtcccagtgcagc
ctgtccggcccgccgcccaactccatggggctatccaacatgtcgtcgaacggatccggg
ctccagtctcacctctaccagaacccgttccccgggatggtcccggcctccctgtctggt
cccaccaacgtgacgagctctccccagctgtgtagctccccggaaaatgacgtctggaga
gggacgagcatcgcctccctgcggcgaaaagcgctggagcacacagtatccatgagtttt
acttag
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integrated database retrieval system
