Salmo salar (Atlantic salmon): 100380675
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Entry
100380675 CDS
T04363
Symbol
chl1
Name
(RefSeq) neural cell adhesion molecule L1-like protein
KO
K06758
L1 cell adhesion molecule like protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
100380675 (chl1)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
100380675 (chl1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
Ig_PDGFR_d4
Ig_6
Fn3_VIN3
HMUDK_HMUD1
Motif
Other DBs
NCBI-GeneID:
100380675
NCBI-ProteinID:
XP_014021837
UniProt:
A0A1S3P2H6
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Position
ssa22:complement(13315274..13391111)
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AA seq
1313 aa
AA seq
DB search
MMNSEIVVCCGAMRMRSSMWSPGLALLMGVVVSVCAFHLTTAIDIPLEVLGHVNIEQLPT
ITEASPSSLIAFPFDESFPMTCEAKGNPKPEYRWTKNGEEFDPYQDPRLIKEDNSGTFVI
PNTGNLTEYQGTYRCYADNELGTAITEEIEFVVPHVPKFPKEKIDPIKVEEGQPVILECN
PPKGIPPLQIYWMTIDLQHIEQDERVSMGLNGDLFFSNALEKDSRRDYCCFAAFPRIRTI
VQKNAMSVVVKSKNSNSDSSSSPGRANSILERKPRFLMPSGVKSETQLVKGDELLLECIA
EGFPTPKIEWVRMGHRLPDRATIENHGKLLSIDRVNEDDSGKYMCKARNILGEANHSFDV
SVEEPPKWVSEPESQLSTIGSDVHIKCSATGTPEPTIQWRVNGKPLKEVPASNRKVLDDA
IVLHNAKSIDSAVYQCEASNRHGTLLANANIMIMNLPPMILTEEGLEYSAVEGKSVVMHC
KVFSSPPAIVTWNKDDSTGSVEGPRFTVHQNGSLEIHNVEKEDMGQYTCYTKNTEGKSAI
TALLDVKDPTKIFQAPEDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDMEIALNHTE
NSGYFLEDGILQIVNVSHRDQGMYKCVARTPVDQDTASALLIVLDVPDAPENLVLSEHKG
RSVKLKWIPGDDHNSSTTDFIIEYEESQWEPGNWNELQRVPGNHGSAVLKLYGHVDYRFR
VSGVNAVGRGSPSEPTERYKTPPAAPDKNPENIKIEGHLAHEMDINWEPLSPIEHNGPGL
EYKVSYKRQDVEEDWHEHVVKRHSFVVKGTPTFVPYEVRIQARNYQGWGPEPKVMTGYSG
EDFPSAAPDDVEVEVMNNSLVKVSWTRVHKDKLHGHLGGYRINWWRLRSLLDSKKTHGNK
HTLTFPGDRNHAMVPGLTPFSEYSLIVMTFNGRGNGPGSHAVNFKTPEGVPEENPVFRVT
DVQKHTVALTWAPPLVANGVVTGYRLEYQLINDTEEVGVLQSMDISSPDTTSCVLRNLEA
VSRYKFYLRSCTRVGCGPQVSEESTTTPVAPSTAVSTVNFNQSASPSPPSTAVSHVSNAT
RSNIVPALLNISSSVSDNFANISWIPGSEQTDSEFYVAYMINRKGNWKISEAVNTSKTFH
IIEGLEPGTAYTVRLMTKNWVDNSSIFEDVIRTRDKGLASIHGGISTQGWFIGLMCAVAV
LTLIVLIACFVNRNKGGKYAVKEKEDLHPDLESQGMHDDTFCEYSDNDEKPLKGSQHSLS
GQIKAEDSGDSLVDYGDEDAQFNEDGSFIGEYAGRKEKRVSVEVKGTTNQSKA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactccgagattgttgtctgctgtggagcgatgaggatgaggtcatcgatgtgg
agcccaggattggctctcctgatgggcgtggtcgtcagtgtctgtgcctttcacctcacc
actgccatagacatcccactggaggttttaggtcatgtaaacattgagcagctgcccacc
atcacagaggcctcccccagctctctgatcgccttccccttcgatgagagcttccccatg
acgtgtgaagccaaagggaaccctaagccagaataccggtggacaaaaaatggggaagag
tttgacccttaccaggacccgaggctgatcaaggaggacaactcggggacgtttgtcatc
cccaacactgggaatctcacagagtaccagggaacataccgctgttacgctgacaacgaa
ctagggacggccataacggaggagattgagtttgttgtgccccacgttcctaagtttccc
aaggagaagattgatcccatcaaggtggaggagggtcagcctgtcattttggagtgtaac
cctcctaaaggaatccctcctttacagatctactggatgaccatcgaccttcagcacata
gagcaggatgagagggtgtccatgggtctgaacggcgacctgttcttctctaacgctctg
gagaaggacagccgcagagactactgctgcttcgctgccttccccaggatacgcaccatc
gtgcagaagaatgccatgtctgtcgtagtcaagagcaaaaattcaaacagtgactcaagt
agcagtcctggtcgtgccaattcaattctggagagaaaaccacgttttctgatgccctct
ggtgtcaagtcggagacacagctggtgaaaggtgatgagctactactggagtgcattgca
gagggctttccaacacccaagattgaatgggtaaggatgggccacaggctgcccgacaga
gcgacgatagagaaccatgggaaactcctgagcattgaccgggtcaatgaggacgacagt
gggaaatacatgtgtaaggctaggaacatcctcggagaggccaaccactcctttgatgta
tcagtggaagagcctcctaagtgggtatctgagcctgagagccagcttagtacgattggc
tcagacgtgcatatcaagtgctctgccactggcactcctgagcccaccatccaatggagg
gtgaatggaaaacctcttaaggaggtcccagcatctaacagaaaagtgttggatgacgcc
attgtcttgcacaacgccaaatcgattgacagtgccgtctatcaatgtgaggcctccaac
agacatggaacactactggccaatgccaatatcatgatcatgaatctgcctcctatgatc
ctgacagaggaaggtctggagtattcagctgtggagggaaagagtgtagtcatgcactgc
aaggtgttcagctctccgcccgctattgtaacctggaacaaggatgactcaacagggtct
gtggagggaccaaggtttacagttcaccaaaatggatcattggagatccataatgtggag
aaagaggatatgggccagtacacatgttacaccaagaatactgaagggaagtctgctata
actgccttactggatgttaaagatcccacaaagatattccaggccccagaggacttgcag
gttctaataggaaccacagcccagctctcctgcctggcggtgtacgacaactccttcagt
ggcgactttgagatcgtgtgggaaaaagacgatatggagatagcgctaaaccacactgag
aattctggatatttcttagaggatggcatactgcagatcgtcaacgtcagccacagagac
cagggcatgtacaagtgtgtggccagaactccagtggaccaggacactgcctctgcacta
ctcatagtgctggatgtccctgatgcaccagagaacttggtgctgtctgaacacaagggc
agaagcgtgaagctcaaatggatccctggggatgaccacaacagctcaaccactgacttc
attattgagtatgaggagagccagtgggagccagggaactggaacgagcttcagagagtt
ccaggaaatcacggttcggcagtcctcaaactttatggacatgttgactatcgcttccga
gtgtctggagtcaacgcggtgggtagggggagtcccagtgagcccacagaaagatacaag
acccctcctgcagcccctgataagaaccctgaaaatataaaaatcgaaggtcatttggca
catgaaatggatatcaactgggagccattgtcccccattgaacacaatgggccaggcctt
gaatataaggtgagctataaacggcaggatgtggaggaggactggcacgagcatgttgtg
aaaagacactcgtttgtggtgaagggcactcccacgtttgtgccatatgaggtcaggatc
caggcgaggaactaccagggatggggacctgaacccaaagtgatgactggctactctgga
gaggacttcccctccgcagcccctgatgatgtagaggtggaggtgatgaacaactcgctg
gtcaaggtcagctggacacgtgttcacaaggacaagctgcacggacatctgggaggctac
aggataaactggtggcggctgcgtagtctgctggactcaaaaaagactcacgggaacaaa
cacacactgacattcccgggggacaggaaccatgccatggtaccagggctcacacccttc
tctgagtacagcctcatcgtcatgaccttcaacgggcgaggcaacgggccaggcagccac
gccgtcaacttcaaaactcccgagggagttccagaggaaaaccctgttttcagggtcaca
gatgttcagaagcacaccgtcgctctcacctgggcacctcctctggttgccaatggagtc
gtcacaggataccggctagagtatcagctaatcaacgacacagaggaggtgggtgtcctg
cagtcgatggacatcagcagcccggacaccacctcgtgtgtcctgcggaacctcgaggcc
gtcagcaggtacaagttctacctgcgctcctgcaccagggtgggctgtgggccccaggtc
agcgaggagagcaccaccacacctgtagcgccttcaacagcggtatccactgtcaacttc
aaccagtctgcctccccctcacctccaagcactgcagtctcccacgtgtccaatgccacc
cgttccaacatagtcccagccctgttgaacattagttcctcagttagtgacaactttgca
aatatcagctggattccgggaagcgaacaaaccgattcagagttttatgttgcatatatg
atcaaccgtaaaggtaactggaagatctctgaggcagtaaacacctctaagactttccac
atcattgaggggctggagcctggaactgcgtacactgtgcgccttatgactaagaactgg
gttgataattctagtatttttgaagatgtaatcaggaccagggataaaggtctggcaagc
atccatggaggaatctccacccagggctggttcatcgggctgatgtgtgccgtggctgtc
ctcacactcattgtgttaatcgcctgctttgtcaacagaaataaaggagggaaatatgct
gtaaaggagaaagaggacctccacccagaccttgaatcccagggtatgcatgatgacacc
ttctgtgaatacagtgacaacgatgagaagccactgaagggcagccagcactctctgagc
ggacagatcaaagcagaggacagtggggacagcctggtggactatggggatgaggacgcc
cagttcaacgaggatggctcctttatcggcgagtacgctggacgcaaggaaaaaagggtg
tccgtggaagtcaaaggaaccaccaatcagagcaaagcgtaa
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