Salmo salar (Atlantic salmon): 100380681
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Entry
100380681 CDS
T04363
Symbol
tba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04210
Apoptosis
sasa04530
Tight junction
sasa04540
Gap junction
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100380681 (tba1c)
09143 Cell growth and death
04210 Apoptosis
100380681 (tba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
100380681 (tba1c)
04540 Gap junction
100380681 (tba1c)
09142 Cell motility
04814 Motor proteins
100380681 (tba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100380681 (tba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100380681 (tba1c)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100380681 (tba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
100380681 (tba1c)
04147 Exosome [BR:
sasa04147
]
100380681 (tba1c)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100380681 (tba1c)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100380681 (tba1c)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100380681 (tba1c)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100380681 (tba1c)
Exosomal proteins of other body fluids (saliva and urine)
100380681 (tba1c)
Exosomal proteins of colorectal cancer cells
100380681 (tba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100380681
NCBI-ProteinID:
XP_014022724
UniProt:
A0A1S3P554
LinkDB
All DBs
Position
ssa22:complement(33455187..33459267)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccgtccacgtgggccaggctggcgtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccagcccgatggcaagatgcccagtgacaag
accatcggaggaggagacgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtagatctggagcccactgtcatcgatgaggtgcgttct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactatgcccgtgggcattacaccatcggcaaagagattattgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
ttcggaggtggcaccggttctggtttcacctccctgttgatggagcgcttgtctgttgac
tacggcaagaaatccaaacttgagttctccatctatccagctcctcaggtgtccacagcc
gttgttgagccctacaacgccatcctgacaacccacaccaccctggagcactctgattgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaaccttgatattgag
cgtccctcctacactaatcttaacaggttgatcagtcagattgtgtcctccatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctatgcccctgtgatctcggcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaacgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggtgacgttgtgcccaaagatgtcaatgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggcagaggcctgggcccgtcttgaccacaagtttgacctgatgtatgcc
aagcgtgcttttgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaggacatggctgccctggagaaagattatgaagaggtgggagcagatagcgtg
gagggagaggatgagggagaagaatactaa
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