Salmo salar (Atlantic salmon): 100380689
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Entry
100380689 CDS
T04363
Symbol
fdft1, fdft
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00100
Steroid biosynthesis
sasa01100
Metabolic pathways
Module
sasa_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100380689 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sasa01006
]
100380689 (fdft1)
Enzymes [BR:
sasa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100380689 (fdft1)
Prenyltransferases [BR:
sasa01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100380689 (fdft1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
GBP_C
Motif
Other DBs
NCBI-GeneID:
100380689
NCBI-ProteinID:
XP_014060894
UniProt:
A0A1S3S979
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Position
ssa06:63290372..63302775
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AA seq
458 aa
AA seq
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MAGACCKCPVSLTVFKRSLCVTPRSPGPASRSLLSGGRLGERGVQEGCWAARPSALRTVG
SYRHPVFLCFSCQESMSASLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD
TVEDDMTIPLEKKVPMLNDFHTYLYQANWCFTESHEKDRQVLEDFPTISLEFRNLGQAYQ
DVISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSQLFSASQLEDPEVGKD
TELANSMGLFLQKTNIIRDYLEDIQVARAFWPQEAWSQFACRLEDLAEPDQLTSALSCLN
LLVTDALRHVPDVITYLARLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQ
AVTLMMQATNMGAVQSIMAQYSQEMLQRVSLTDPSRDKTLFILGVIQERTLSQATLASRT
AHLSPMYLSAAMILAALSWQYLSTTAGQPPGTADMQGH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcttgctgcaagtgtccggtttctctcacggtgttcaagcgctctctctgc
gtcaccccgcggagccctggacccgcttcacggtcccttctctccgggggacggctgggc
gagaggggcgtgcaggagggatgttgggccgcccgccccagcgctttgcggacagtaggc
tcttaccgacaccccgtgtttctctgtttctcttgccaggaatccatgagtgcgagcctg
cggacatgctacctctatctgaaccagaccagtcgcagtttcgccgctgttatccaggcg
ctagacggagagttacggcatgcggtgtgtatcttctacctggtcctacgggcccttgac
acggtggaagatgatatgaccatccccctggagaagaaggtgcccatgctgaatgacttc
cacacgtacctttaccaggccaactggtgcttcactgagagccacgagaaggacaggcag
gtcctggaggacttccccacgatttccttggagttcaggaacctgggtcaggcataccag
gatgtgatctcggatatctgccaccgcatgggagttggaatggctgagtttctggagaag
aaagtaggctccatgaaggagtgggaccagtactgtcactatgtggcagggctggtgggt
ataggcctgtcccagctgttctctgcctcccagctggaggacccagaggtgggcaaagac
acagagctagccaactccatgggcctgttcctccagaagaccaacatcatcagagactac
ctggaggatatacaggtggcgagggccttctggccacaagaggcatggagtcagtttgcg
tgtcgtctggaggacctggcagagcctgaccagctgacctcagccctgtcctgtctcaac
ctgctggtgacagacgccctgcgccacgtccctgatgtcatcacctatctggcacgccta
cgcaaccagagcgtcttcaacttctgcgccataccacaggtgatggcgatagcgaccctc
tcagcctgttacaacaaccctcaggtattccagggcgtggtgaaaatcaggaagggtcag
gccgtcaccctcatgatgcaagccaccaacatgggtgccgtgcaaagcatcatggcccaa
tacagccaggagatgctacagagggtgtccttgacagatccatcccgggacaaaaccctg
tttatcctgggtgtgatccaggagaggactctctcccaagccaccctggcctcccggact
gcccacctctcccccatgtacctctccgctgccatgatcctcgccgccctcagctggcag
tacctaagcactacagccggacaacctcccggcactgctgacatgcagggccattga
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