Salmo salar (Atlantic salmon): 100380690
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Entry
100380690 CDS
T04363
Symbol
k0652
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100380690 (k0652)
04136 Autophagy - other
100380690 (k0652)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100380690 (k0652)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
100380690 (k0652)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100380690 (k0652)
Atg1 complex
100380690 (k0652)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100380690 (k0652)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100380690
NCBI-ProteinID:
XP_013981920
UniProt:
A0A1S3KTJ2
LinkDB
All DBs
Position
ssa11:9812110..9823750
Genome browser
AA seq
516 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQVTTQM
GVPGKEGGVPQQVPVQPCHGAQAEHRRVSSCHPADHVTATPSSSGEDTETPSRSVAVKSG
SPCGLLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESSATS
SPLQGSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLASLTI
DVSSQSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgccttgaagacggtgcaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcatgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcatccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagccgct
gacttctgccacccctccaccttaaacgctgccaacccacaccaggtaaccacccagatg
ggagttccagggaaggaggggggcgtaccccagcaggtgcctgtgcagccttgtcatgga
gcccaggcagagcatcgacgagtgtcctcatgccaccctgctgatcatgttaccgccacg
ccctccagcagtggtgaggacacagagaccccgtcgaggagcgttgcggtgaagagtggc
tctccctgtggcctactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaag
ccaggcacacaggtaaccacagcaagcctggacttaccatttgcagcgtttgctcccaga
gcctatgacctcgaggaaaatgaccctatggttcagccgccggagtcctcagccacgtcc
tctcccctgcagggcagtttgcactcccaaggctctggtgagagtggaggcccggcacag
gacgactttgttatggtggactttaagcctgcgttctccaaggatgacctccttcccatg
gaccttggcacattctacagagagttccagaaccccccacagctcgccagcctcactatt
gatgtcagttctcagtccatggcagaagacctggactctcttcctgaaaaactggcagta
tacgagaagaacattgatgaatttgatgcatttgtggacacattgcagtag
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integrated database retrieval system
