Salmo salar (Atlantic salmon): 100380718
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Entry
100380718 CDS
T04363
Symbol
top2a
Name
(RefSeq) topoisomerase (DNA) II alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
100380718 (top2a)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100380718 (top2a)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
100380718 (top2a)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Topoisomerases
100380718 (top2a)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
100380718 (top2a)
Centrosome formation proteins
Centriole proteins
100380718 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
DTHCT
Toprim
Motif
Other DBs
NCBI-GeneID:
100380718
NCBI-ProteinID:
XP_014014468
UniProt:
A0A1S3NG92
LinkDB
All DBs
Position
ssa19:complement(52454547..52479328)
Genome browser
AA seq
1561 aa
AA seq
DB search
MSEPLKSLFENKVVEKTKKDPNRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQLWVY
DEDVGMNCRDVTFVPGLYKIFDEILVNAADNKQRDKTMTCIKVNIDPENNSISVWNNGKG
IPVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSSKFTVETACK
ESKKTFKQTWYDNMGRAGEHKIRSFDGDEFTCITFQPDLSKFKMQTLDKDTVAIMTRRAY
DIAGATKGVRVFLNGKRLPVTSFRNYVDLYLKDKVDELGVPLIVVHEVVSERWEVCLTLS
EKGFQQVSFVNSIATTKGGRHADYVADQVTSKLIEVVKKKNKAGVVVKPFQVKNHMWIFV
NCLIENPTFDSQTKENMTLQQKSFGSTCPLSDKFIKQANSCGIVESIMNWVKFKAQTQLN
KKCSAVKHNKIKGVPKLDDANDAGGKNSNGCTLILTEGDSAKTLAVSGLGVVGRDRYGVF
PLRGKMLNVREASHKQIMDNTEINNVIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQDL
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKATNKKQELSFYSIPEFNEWKDMQPN
IKSWKIKYYKGLGTSTSKEAKEYFSDMHRHRIPFKYAGPADDEAITLAFSKKRIEERKEW
LTNFMVNRRQRREHNLPEEYLYGQATKSLSYNDFVNKELVMFSNSDNERSLPCLIDGLKP
GQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIVGLAQNFVGSNNLNLL
QPQGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAVDDNLLKYNYDDNQRVEPEWYIPI
IPTVLVNGADGIGTGWASRIPNFDIREIVNNIHRMLNGEEPLPLLPSYKGFKGTIDQLMT
NQYMNNGEVAIIDSTTIEISELPVKTWTQAYKENVLEPMLNGTEKVQALITDYKEYHTDT
AVRFVVKMTEERLREAEAAGLHKVFKLQQSLTCNSMVLFDHVGSLKKYELVQDILKDFFE
LRMKYYVLRKDWLAGMLGAESAKLTNQARFILEKIEGTLVIENKPKKQLILMLTEMGYDS
DPVKAWKEAQEKDRSVEETQDDEEEDKEEDATGPDYNYLLNMPMWYLTKEKKEELCKQRD
AKMTELNTLKKKSPADLWKEDLAAFTEELERVEEKDRQNANMPVVKGKAVKGKVVKVKRE
TTPQGRRVIPRITSTMKAEATRKAVVMKGKKGEEVVMKMEFDAHGGENGEMAAEEIGLAA
RMTKKLKAPAKDKVSKALGKQTTLSFKPMAAKKNPWSDDSGSDSEMVIPLDVDSVVPKEK
PERKAKAAVKYMYSSEDEFDCGLSSPNKAASVDDDSLVPEPNAAIDSEADSPPPKAPEPT
KMVKSKSVTVSEDKSKSSSQSDGDDATASMPPAKPKAAPKKPAAPKKPAAPKKPAAAKKK
PADVKQPSIVDALSKPKPASKTAAKKIPSFDSSDSGSSDAPTKAAPAKRKALDSDDSDRS
ADDLMSRIKGKKTTVASKKTKVWDDDSFHMSDEEVVAPRSKASRAKKPVTYNFESDSDEG
F
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccattgaagagcttgtttgagaacaaggtggtggagaagaccaagaaggac
cctaaccgcctgtcagtggaaaggatctaccagaaaaagactcagctggagcacattctg
ctacgtccagacacctacattggctctgtggagcctgtcacacagcaattgtgggtgtat
gatgaggatgttggaatgaactgtcgagatgtgacctttgtaccaggtctctacaagatc
tttgatgagatccttgtgaatgctgccgataacaagcaaagggataaaaccatgacctgc
attaaagtaaacattgaccctgagaacaactccatcagtgtgtggaacaatgggaagggc
atccctgtggtggagcacaaggtggagaaggtctatgtgccagctctcatcttcggacag
ctcctcacctccagtaactatgacgacgaccagaagaaggtcaccggtggacgcaacggc
tatggtgccaagctttgcaacatcttcagcagcaagttcaccgtggagacagcctgcaag
gagtccaagaagaccttcaagcagacgtggtatgacaacatggggcgggctggggaacac
aagatcaggtcgtttgacggcgacgagttcacgtgcatcaccttccagccggacctgtcc
aagttcaagatgcagaccctggacaaggacacggtggccatcatgacccgacgggcttac
gatatcgccggtgccaccaagggagtccgcgtgttcctcaatggcaaaaggctacccgtg
acgagtttccgtaactacgtggacctgtacctgaaggacaaggtggatgagctgggcgta
cccctcattgtggtccatgaggtggtgagcgagcgctgggaggtgtgcctcacattgagt
gagaagggcttccagcaagtcagctttgtcaacagcatcgccaccaccaagggtgggaga
catgctgactacgtggcagaccaggtgacgtccaagctcattgaagttgtcaagaagaag
aacaaggctggcgtggtcgtcaagcctttccaggtgaagaaccacatgtggatttttgtc
aactgcctgatcgagaaccctaccttcgactcccagaccaaggagaacatgaccctgcag
cagaagagcttcggttccacctgccccctcagtgacaagtttatcaaacaggccaactcc
tgtgggatagtggagagcatcatgaactgggtgaagttcaaggcccagacgcagctcaac
aagaagtgctctgccgtcaagcacaacaagatcaagggagtgcccaaactggacgacgcc
aacgacgcaggtggtaagaactccaacggctgcactctgatcctgacggagggagactcg
gccaagacgctggccgtgtctggtctgggcgtggtgggcagagaccgctacggagtcttc
cctctcaggggaaaaatgctcaacgtgcgggaagcctcacacaagcagatcatggataat
actgagatcaacaatgtcatcaagatcctggggctgcagtacaagaagaactacagcgac
ccagaatccctcaagtccctgcgttacggcaaactcatgatcatgaccgatcaggacctg
gatggctcccacatcaaggggttgcttatcaacttcatccaccacaactggccctcactg
ctgcgccacaacttcctggaggagttcatcacccccatcatcaaggccactaacaagaag
caggagctgtccttttacagcattccagagttcaatgagtggaaggacatgcagcccaac
atcaaatcttggaaaataaaatactacaaaggtttgggtaccagcacttcgaaggaagcg
aaggagtacttctctgacatgcatagacatcgcattcccttcaagtacgctggacctgcc
gacgacgaggcaattaccctggcctttagcaagaaaaggattgaggaacgtaaagagtgg
ctgaccaacttcatggtcaacagacgccagcgcagggagcacaacctgcctgaggagtac
ctgtatggtcaagccaccaagtccctgtcctacaatgattttgtcaacaaggagcttgtg
atgttctctaactcagacaacgagaggtccctcccctgcctgatcgatggtctgaagccg
ggccagaggaaggtgctgttctgctgcttcaagaggaatgacaagcgggaggtgaaggtg
gctcagctggctggttctgtggccgagatgtcagcctatcaccatggagagatctctctc
atgatgaccatcgttggcttggcccagaattttgtgggcagcaacaacttgaacctgctg
cagcctcagggtcagtttggcacgcggctgcacggtggcaaggactctgccagcccccgt
tacatcttcaccatgctcagccccctggcccgtctactcttccccgcggtggacgacaac
ctgctgaagtacaactatgacgacaaccaacgcgtggagcccgagtggtacatccccatt
atccccaccgtgctagtgaacggcgccgacggcatcggcacgggctgggccagccgcatc
cctaacttcgacatccgcgagatcgtcaataacatccaccgcatgctgaatggggaggag
ccgctgcctttgctccccagctacaagggcttcaaaggcaccattgaccagctgatgacc
aatcagtacatgaacaatggagaggtggccatcatcgacagcaccaccatcgagatctct
gagctgcccgtcaagacatggacacaggcctacaaggagaatgtgctggagcccatgctg
aacggcacagagaaggtccaggccctcataaccgactacaaggagtaccacacggacacc
gcggtacgcttcgtggtcaaaatgaccgaggagaggctgagggaggccgaggcggctggc
ctgcacaaggtcttcaagctgcagcagtccctcacttgcaactcaatggtgctgtttgac
catgtgggcagcctgaagaagtatgagttggtgcaagatatcctgaaggatttctttgag
ttaaggatgaagtactacgttctgagaaaggactggctggccggcatgctgggggcagag
agtgccaagctcaccaaccaggcccggttcatcttggagaagattgagggaaccctggtc
atcgagaacaagccaaagaaacagctcatcctcatgctgacggaaatgggctacgactcc
gaccccgttaaggcatggaaagaggctcaggagaaggacaggagtgtggaggaaacccag
gatgatgaggaggaggacaaagaggaagacgccactgggccagactacaactacctgtta
aacatgccgatgtggtacctcaccaaggagaagaaagaggagctgtgcaaacagagggat
gccaagatgaccgaactgaacaccctgaagaagaagagcccagctgatctctggaaggag
gacctcgctgccttcactgaggagctggagcgtgtggaggagaaggatcggcagaacgcc
aacatgcccgtggtgaagggcaaggctgtcaagggcaaggtggtgaaggtgaagcgggag
accacgccccaggggcgccgcgtcatcccacgcattaccagcaccatgaaggctgaggcc
accaggaaggccgttgtcatgaaaggcaaaaagggtgaggaagtggtgatgaagatggag
tttgatgcacatggaggagagaacggagagatggctgctgaggagattggcctagcagcg
cgaatgaccaagaaactcaaagcaccagccaaggacaaagtatcaaaggcattgggcaaa
cagaccaccctgtcgttcaagcccatggcggccaagaagaacccgtggtctgacgactct
ggctcagacagtgagatggtgattccactggatgttgactcagtggtacccaaggagaaa
cctgaacgcaaagccaaagcagctgtgaagtacatgtacagcagtgaggatgagttcgac
tgtgggctgagctcccccaataaggcagcgtccgttgatgacgactcccttgtccccgag
cccaacgctgcgatcgatagcgaggcagactctccaccgcctaaggctcctgagcccaca
aagatggtgaaaagcaaatcagtgactgtaagtgaagataaaagcaaatccagctctcag
tctgatggcgacgatgcgacggcctctatgcctccagccaaacccaaggcagcccccaag
aaaccagcagcccccaagaaaccagcagcccccaagaaaccagcagctgccaagaagaag
cctgcagatgtgaagcagccgtccatcgtggatgctctgtccaagcctaagccagcctcc
aaaaccgccgccaagaagatcccgtcgtttgactccagcgactcgggctcgtccgatgcc
ccgactaaggctgctcccgccaagcgcaaggccctggacagtgacgactcggacagaagc
gctgatgacctcatgtcccgcatcaagggcaagaagactaccgtcgccagcaagaaaaca
aaagtatgggatgatgacagcttccatatgtcagatgaggaggttgtggctcccaggagc
aaagcatcccgtgccaagaaacctgtcacttacaactttgaatcagactctgatgagggc
ttttag
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integrated database retrieval system
