KEGG   Salmo salar (Atlantic salmon): 100380723
Entry
100380723         CDS       T04363                                 
Symbol
xpo1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
sasa03013  Nucleocytoplasmic transport
sasa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100380723 (xpo1)
   03008 Ribosome biogenesis in eukaryotes
    100380723 (xpo1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100380723 (xpo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100380723 (xpo1)
   03009 Ribosome biogenesis [BR:sasa03009]
    100380723 (xpo1)
   03016 Transfer RNA biogenesis [BR:sasa03016]
    100380723 (xpo1)
   03036 Chromosome and associated proteins [BR:sasa03036]
    100380723 (xpo1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100380723 (xpo1)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100380723 (xpo1)
  Pre-60S particles
    100380723 (xpo1)
Transfer RNA biogenesis [BR:sasa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100380723 (xpo1)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100380723 (xpo1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v
Other DBs
NCBI-GeneID: 100380723
NCBI-ProteinID: XP_013986813
UniProt: A0A1S3L782
LinkDB
Position
ssa12:26116705..26131102
AA seq 1070 aa
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
SLNPASQHNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaattctatgtactatgacattgga
tcacagcaacgcatggcacaggaggtgctgaccaacctgaaggatcacccggacgcgtgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcacta
caaattctggagactgtgatcaaaacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgacgccgcaaatgtt
gagaaagatggagtgtacattgctaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacatcgtgggtgccagccgcaccagc
gagagcctatgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtatttgac
ttctccagcggacagatgacccaggtcaaggccaagcacctgaaggacagcatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggagaactcccagaatgcccct
ctggtccaagccacactcgagactctcctgcgtttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagcgtcaaccagtacgag
gagcagtttgtcaacctcttcacactcaccatgtgtcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaacggcaaggacgatgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcacggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctcttcactacatgctgctggtgtctgaggtg
gaggagacggagatctttaagatctgtctggagtactggaaccacttggcggcggagctc
tacagggagagccccttctctacctccacctcccccctgctctctgggagccagcacttt
gacgtgcccccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaagccagaggaggtgctggtggtggagaacgaccagggagaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcaccgtc
atcaaggacctgctgggcctttgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgtcgtcaacaagctctttgagttcatgcacgagactcacgacggcgtg
caggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgccactttgtc
caggtgcaagtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgatctccagccccaacaggtgcacacattctacgaggcggtgggctacatg
atcggggcccagacggaccaggccgtgcaggagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagacggtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacaccctttcgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggctgtactcatcgactaccagcgcaacgtccccgccgccagagagcccgaggtg
ctaagcaccatggcgaccatcgtcaataagctgggtggacacatcaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaagag
tacccagagcataggacccatttcttctacctcctccaagcggtgaactcgcagtgcttc
ccggccttcctctccattcccccagcccagtttaaactggttctggactccattatctgg
gcctttaaacacaccatgaggaacgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaggctgctgcacagagcttctaccagacctacttctgt
gacatcctccagcacatcttctccgtcgtcacagatacctcgcacacagcagggctaacc
atgcacgcgtccatcctggcgtacatgttcaacctggtggaggagggtaaaatcagcgcc
tccctcaacccagccagccagcacaaccagggctacgttcaggagtacgtggccaacctg
ctcaagacggccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtctg
ttcagcttgaaccaggacatccccgctttcaaggagcacttgagggacttcctggtgcag
atcaaggagtttgctggcgaggacacaacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctgcagatgtccgtccccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactaa

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