Salmo salar (Atlantic salmon): 100380723
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Entry
100380723 CDS
T04363
Symbol
xpo1
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
sasa03013
Nucleocytoplasmic transport
sasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100380723 (xpo1)
03008 Ribosome biogenesis in eukaryotes
100380723 (xpo1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100380723 (xpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100380723 (xpo1)
03009 Ribosome biogenesis [BR:
sasa03009
]
100380723 (xpo1)
03016 Transfer RNA biogenesis [BR:
sasa03016
]
100380723 (xpo1)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100380723 (xpo1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100380723 (xpo1)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100380723 (xpo1)
Pre-60S particles
100380723 (xpo1)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100380723 (xpo1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100380723 (xpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
100380723
NCBI-ProteinID:
XP_013986813
UniProt:
A0A1S3L782
LinkDB
All DBs
Position
ssa12:26116705..26131102
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
SLNPASQHNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaattctatgtactatgacattgga
tcacagcaacgcatggcacaggaggtgctgaccaacctgaaggatcacccggacgcgtgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcacta
caaattctggagactgtgatcaaaacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgacgccgcaaatgtt
gagaaagatggagtgtacattgctaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacatcgtgggtgccagccgcaccagc
gagagcctatgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtatttgac
ttctccagcggacagatgacccaggtcaaggccaagcacctgaaggacagcatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggagaactcccagaatgcccct
ctggtccaagccacactcgagactctcctgcgtttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagcgtcaaccagtacgag
gagcagtttgtcaacctcttcacactcaccatgtgtcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaacggcaaggacgatgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcacggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctcttcactacatgctgctggtgtctgaggtg
gaggagacggagatctttaagatctgtctggagtactggaaccacttggcggcggagctc
tacagggagagccccttctctacctccacctcccccctgctctctgggagccagcacttt
gacgtgcccccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaagccagaggaggtgctggtggtggagaacgaccagggagaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcaccgtc
atcaaggacctgctgggcctttgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgtcgtcaacaagctctttgagttcatgcacgagactcacgacggcgtg
caggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgccactttgtc
caggtgcaagtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgatctccagccccaacaggtgcacacattctacgaggcggtgggctacatg
atcggggcccagacggaccaggccgtgcaggagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagacggtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacaccctttcgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggctgtactcatcgactaccagcgcaacgtccccgccgccagagagcccgaggtg
ctaagcaccatggcgaccatcgtcaataagctgggtggacacatcaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaagag
tacccagagcataggacccatttcttctacctcctccaagcggtgaactcgcagtgcttc
ccggccttcctctccattcccccagcccagtttaaactggttctggactccattatctgg
gcctttaaacacaccatgaggaacgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaggctgctgcacagagcttctaccagacctacttctgt
gacatcctccagcacatcttctccgtcgtcacagatacctcgcacacagcagggctaacc
atgcacgcgtccatcctggcgtacatgttcaacctggtggaggagggtaaaatcagcgcc
tccctcaacccagccagccagcacaaccagggctacgttcaggagtacgtggccaacctg
ctcaagacggccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtctg
ttcagcttgaaccaggacatccccgctttcaaggagcacttgagggacttcctggtgcag
atcaaggagtttgctggcgaggacacaacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctgcagatgtccgtccccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactaa
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