Salmo salar (Atlantic salmon): 100380724 Help Entry 100380724         CDS       T04363                                  Symbol helz2, pr285 Name (RefSeq) helicase with zinc finger 2   KO K25165   3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sasa03019]     100380724 (helz2) Enzymes [BR:sasa01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.13  Exoribonucleases producing 5'-phosphomonoesters     3.1.13.1  exoribonuclease II      100380724 (helz2)  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      100380724 (helz2) Messenger RNA biogenesis [BR:sasa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      100380724 (helz2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 RNB OB_HELZ2 AAA_30 AAA_19 ResIII AAA_22 UvrD_C_2 OB_Dis3 nSTAND3 AAA_16 UvrD_C PhoH SLFN-g3_helicase DEAD AAA UvrD-helicase Rrp44_CSD1 DUF4335 AAA_24 ATPase zf-C2H2_jaz zf-met Bac_DnaA Motif Other DBs NCBI-GeneID:  100380724 NCBI-ProteinID:  XP_014023566 UniProt:  A0A1S3P7J2 LinkDB All DBs Position ssa22:complement(48816984..48841319) Genome browser AA seq 2711 aa AA seqDB search MTTKERIQRQFPGKFMELCKTCFHHSPRRISNKGNDSKCNSTHRHVWKATLVLRDNKNTL LYEEVRPLPHLNSRSWLYCKYVMNGDQCSHGAHRCWFAHSKVEMTVWNAESQEGFVRAEL LPAVQPVVAAASLSQTQHYCKACNLWLSSWGGFQNHLNTFNHIKRTNEYNNETTTEWKYR DPPQTNQTYKLCERRASTCELGSNCVDAHSAEELQEWRTRDKTDRKTVIAAEEQGLLSYQ DNLLRENRDRFNKAIIMSEAVSGVNISCDKDMMISGQRENVPLTWKFRIQSERTLAHVAL LKQEPGASFSLDENSSEPRTYSTGEPFCNSDMTYDITVSFKSNNPGLYEQWLVFDFDTRP VLLQKLKVNVGKEPSIQLVAPPEDDIHPSLNQERWHQGNRDIIPYMEKTEAQEKLLKEYE PQICMPYKPLDDRNMPINHQNYKERMHSFLYTEEQAEDQVVSRLNVQTTITLSVTLEATV DDPLFGMKIAPLGELFCAVSVPYNLTPDIPEGLMLRRSIQSALIAPVSSDNQSHKVYEAI ILKDATSKNKMHLKLSERCCSDLKLQKTETCEMEVQFQLNRLKFCEMHQAIDLLPDTERV LPDFSNCIVPVSKTQQNYNLNAKQQAAMEFIIGDTDGGGSVSPLLIYGPFGTGKTLTLAT AAKELVRQPHTRVLICTLTNSSADLYVKGHFHESVNSGDLEIKPLRIKAEESSVQSTDEI TLQYCHRSKNGQFFSLPDKDTVDSCRVVITTTAMARHLHDLKLPDGYFTHILIDEASQML ECEALMALGLAGPVTRVVLAGDHMQMGPKLFSVDDDQRSNHTLLNRLFHYYQAQESSAAL KSRIIFKENYRSTKEIVEFVSTNFYVGKSDAIKAVGNVPAHPNCHPLRFHHVRGESHLDT TSMSWFNREEVASVVEVVQNLLRDWPPTWGNQDQSSICVLSEGCQVSLIRKELRKKRHGQ VTVENIANVQGKQFRAIVLTAVQTRDSLLSSDSLCHEFFNDARVLNTVMTRAQSQVVVVG DAAALCYFGKSSRIWKAYIDHCISKNSADPQTLTEDYLKQEVREISKFVKGDEEDNSDSD SSISEIPDMDDPILRELLDEGKDVRVTVTADGLLGITQGEPIVNPINGLEMNTSQDSSPL YLQALIKRDPSIYKHCHLSLERFDSGYAIPLEEPSLRISIKGRKNIGRSFPGDQVVVEIL DNECHPPNGKVLDVVKVENASMVFVCTIDNFDNQVMTPINNCISKIYTPFWRDKPNYIAV RKLEDLRVEEFVKINEESKRNNLFVVKVLKWREQFRYPLGVVVKVLPKVASLDSGLEVLD IEYQLTRATSVEKDHEILKELNTDTQNRKHYQEFITFTIDPAHSKDLDDAISVRDLGQHY EIGVHIADVASLVTKDSLLDKNAQHNGTAFYPPGKEPVYMFPVCLSTKYFSLLPGCERNA ISLMVKIDKKTDRIKTSKFSLSKIKSDRKLSYEEAENIIQNSDVIDQRYDTLEGCLAKAC HFSEVHRKDRKQEDWHYKSPDDDVIVGRRRSHKMVEELMVMFNHAVTELLLKDAKTVSCT PVRCQDKPNPEKLCQLKDKYSSLIPLSIHFCHCIDQIGNVDDNQRDAVSKPYPGVSNQML ATRTENKDHHGQVVQPSETFSLLTSIVRSLESAFQDKDIPRIVDLIATDDIHPQLLPLII ELRKTIHRAYVLRSNSTYLSRVGHYDLQLESYTWASSPIRRYVDIIVQRLLHSVLENKAV RYTSLEIDQSCLSFSRKSEKQKMYERKAHCLSFASQLNNQSAQKIAFVIDASPAGNSLTV YFPFNRSSMPENILIMYRDLQLTDQPEFNEHNNHVVLKWKRRVYSFTNENIHAELQQQSP HPFVTSVPTDLWKGMLSALKEENLDIVFQSLQTISSSVNDNQQVCSGLLQYTPTTARTNP NPGHYIELPLRVKSGETLKVQLGTDTQRGLLVPVVQMLVVCNKFEICLEHSKDPTLCFSK YALHSSKKTYTTYQEYQKIWKPLCEMESASNAVTENDSIVLEDVSLTWKQIQKESQLGGF FQLSLEKMKQWAIEYGLKHSFLCIRMRYQNRVDLSNNGADDDQHVDLSNIPSLIWVAHGI TTGVTDEDEAKNLSYVQIDFRINHMSIAKIPERVFGKDTRFTVELIPKLLPDVRKEAAID NLTQANELVKNISLGKRTNSAPVTKELRPARFDIKVHSSKFPDLNISQTRAIKEALDNRF TLIQGPPGTGKTVVGVHLVYWFFLQNQKDPNHLRPKAVGGSSKRKCILYCGPSNKSVDVV AGQLLKLRKVLKPLRVYSEQMEMLEFPYPGSNLKLSRRSIREERPKRELSSITLHHLIRM PENPFSNEIIYFDARIQRGEDLTDKEIESYKVLLSQARNHELMRHDVILCTCTAASNPNF YKLDLKQIIIDECAMATEPEAFIPLVTHKPEQIVLLGDHKQLQPITHSDLSARLGMRKSL FERYMEKALMLDTQYRMHERICEFPSKEFYNGILKTGATPKDSVLLAQSHHLTPILFGHV SGKEISLVVSTERGNENSKANSAEAEESVRIASLLIKHAGVAASDIAILTPYNAQVAKVN ETLLMKHIQNVNVNTITKSQGSEWRYVILSTVRSCPKSEIDTEPTKAWLTKKLGFVMDPN QVNVGITRAQEGLCIIGNQELLRCSSLWKRLLVHYQQCGCVVDPAKDIQVQNPHVKTKSK YKRASKFQNRK NT seq 8136 nt NT seq  +upstreamnt  +downstreamnt atgacgactaaagagagaattcagcgccagttccctggcaagttcatggagctctgcaaa acttgcttccatcacagtccacggcggatctccaataagggcaacgactcgaagtgcaat tccacacacaggcacgtttggaaggcaactctagttcttcgtgacaacaaaaatacactg ttgtatgaggaagtcaggccgctgccccacttgaacagccgctcatggctgtactgtaaa tatgttatgaatggtgaccaatgctctcatggcgcccatcgatgctggtttgcacacagt aaggtagagatgaccgtgtggaatgctgagagccaggaggggtttgttcgggctgagctg cttccggctgtacagccggtggtggcagcagcttctctgtctcagacccagcactattgc aaagcctgcaatctatggttgtcatcatggggaggtttccagaaccacctcaacacgttc aatcacatcaaaaggaccaacgagtataacaatgagacaacgactgagtggaagtatcga gacccacctcaaaccaaccaaacctacaaattgtgtgaaaggagggcctctacatgtgag cttgggagcaactgtgttgatgctcactcagcggaagaactacaggagtggcgcacaaga gacaagactgatcggaagacagttattgctgctgaagagcagggtttactttcataccag gacaatctactgagagagaacagggatagatttaacaaagctattattatgtccgaggca gtgtctggtgtgaatatcagctgtgacaaggacatgatgatttcaggtcaaagagaaaat gtgccgctgacatggaagttcagaatacagtcggagagaacccttgcacatgtagcatta ctgaaacaggaacctggagcctctttctccctggatgaaaacagttctgagccccgcact tactccacgggtgaaccgttctgtaactcagacatgacctatgacatcaccgtgtccttc aagtccaacaacccgggtctttacgaacagtggttggtgttcgactttgacacaaggcca gtgctcttgcagaaactgaaggttaatgttggaaaagagccttccattcagctagtggcg ccaccagaggacgacatccatccatctttaaatcaagaacgctggcatcaggggaacagg gacatcatcccatacatggagaagacagaggcacaggaaaagctgcttaaggaatacgag cctcagatttgtatgccatataaaccacttgatgaccgcaatatgcccataaatcaccag aactacaaagagagaatgcacagcttcctgtacacagaggagcaggcagaagatcaggtg gtttcaagactcaacgttcaaacaaccatcactttgtcggtcaccctagaggccactgta gacgaccctctgtttgggatgaagatagctcctctaggggaactattctgtgctgtctca gttccttataatctcaccccagacatcccagagggtttgatgctgagacgaagcatccaa tcagctctcatagcaccagtatcttcagataatcaaagtcacaaggtctacgaagccatc atcctcaaagacgccacaagtaagaataaaatgcacttgaagctgtctgaaagatgctgc tctgacctgaagctccaaaaaactgaaacatgtgaaatggaagtccagttccagctgaat cgtctgaagttttgtgagatgcaccaagccatagatctccttccagacacagagagagtg ctaccagacttcagtaactgcattgtccctgtgagcaaaacacagcaaaattacaacctc aatgcaaagcagcaagcagctatggaatttatcattggagacactgatggaggaggaagt gtctcaccactcctcatttatggaccgtttggaactgggaaaacccttactctcgctacg gcagctaaagagctggtacggcagcctcacaccagagtactgatctgcacacttacaaac agttctgcagatttgtatgtgaagggtcatttccatgagtctgtcaactctggagatctt gaaatcaaacctcttagaataaaggcagaggaatcatcggtacaatctactgatgagatc accttacagtactgtcatcgttccaaaaacggacaattcttctccctacctgacaaagat acagtcgactcctgtagggtggtcataacaactactgcaatggcaaggcacttacatgac ctgaagcttcctgatggctacttcacccacatcctgattgacgaagcgtcccagatgctt gaatgtgaagctctgatggcccttggtctggctgggccagtaactcgagtggttctagct ggagatcacatgcagatgggaccaaagctcttttcagtggacgatgaccaacgctccaat cataccttgctgaaccgtctgttccactactatcaagcccaggagagtagtgcagctttg aaaagcagaatcattttcaaagagaactatcgctccaccaaagagatagtagaatttgtg tccactaacttctacgttggcaagtctgatgccatcaaggctgtaggtaatgttccagct cacccgaactgccaccccctgaggttccaccatgtcagaggagaatctcacttggacacc acatccatgtcgtggtttaatcgtgaagaggttgcatccgtggttgaagtagtgcaaaat ctgctcagagattggccacccacatggggaaatcaggatcaaagctcaatttgtgtcctg tctgaaggatgccaggtttcactgattaggaaagagcttcggaaaaaaagacatggccaa gtaactgtggaaaatatagccaatgttcaaggaaaacagttcagggcaattgtattgaca gccgttcaaacccgtgacagcctcctttcctctgactcactttgtcatgagtttttcaac gatgctcgcgtactgaacacggtcatgactagggctcaatcccaggttgttgtagttgga gatgctgctgctctctgctactttgggaaaagctcaaggatatggaaagcctacatagac cactgcatcagcaaaaacagtgcagatccacaaacccttactgaagattacttgaaacaa gaagtaagagagatttcaaaatttgtcaaaggggatgaggaggacaacagtgatagtgac tcatccatatctgagatacccgacatggatgacccaatactgagggagcttcttgacgag ggtaaagatgtacgagtcactgtaacagctgacggcctgttgggtatcacccagggggag ccaattgtcaacccaataaatggacttgagatgaacacaagccaagacagctcccctttg taccttcaggcattgataaagagagacccgagtatctacaaacactgtcacttgagtttg gagaggtttgactcaggctatgccatacctcttgaagagccctccctccgcatttctatc aaaggtagaaagaatattggtcgttcttttcctggagatcaggttgttgtggagatcttg gacaatgagtgtcatcccccaaatgggaaagtgctagatgtggtgaaggttgaaaatgcc tccatggtgtttgtctgtaccattgataactttgacaaccaggtgatgacacccatcaac aactgcatctccaaaatatacaccccattttggagggacaagccaaactacattgccgtg cgaaaactggaggatctgagagttgaagagtttgtgaagataaatgaggaatccaaaaga aacaatctctttgttgtcaaagtcttgaagtggcgagagcaatttcgataccctttagga gttgtcgtaaaagtccttcccaaagtggcatctttagatagtggactagaagtattggac atagagtatcaactgacaagggccacttctgttgagaaagaccatgaaattctcaaggaa ctgaacacagatacgcaaaatcgaaagcattatcaagaattcataacatttacaattgac ccagcacattccaaggatcttgatgatgccatcagtgtaagagatttaggtcaacactac gagattggagttcacattgctgatgttgcaagccttgtgaccaaggacagcctattggac aaaaatgcacaacacaatggaactgctttttatccccctggaaaggagcctgtttatatg ttcccagtttgtctgagcaccaagtatttcagtctactccctggatgtgaacgaaatgcc atatcattgatggtgaaaattgacaagaaaacagaccgcatcaagacaagtaagtttagc ctatctaaaataaagtctgatagaaagttgtcatatgaggaagctgaaaacatcatccaa aactctgatgttattgaccaacgatatgacactttagagggctgcctcgccaaagcatgt cacttttctgaggttcacagaaaggacaggaaacaggaagactggcactataagtcccct gatgatgatgtaatcgttggtagaagacggtctcataagatggtggaagagctcatggtt atgtttaaccacgctgtcactgaactgttgctcaaagatgcaaagacagtcagctgcacc ccagtcagatgccaagacaagccaaacccagagaagctttgtcaactaaaagataaatac agttctctgattcccctgtccattcatttctgtcactgcattgatcagattggtaacgtt gatgataaccagagggatgcggtttctaaaccttacccaggtgtgtccaatcagatgctt gcaacgagaacagagaataaagaccatcatggtcaagttgtccagccatctgagacattc tctctattaacatccattgtgaggagtcttgagtcagcatttcaagacaaggatatccct agaattgtggacctgatagcaactgatgacattcatccccagctactgcctttgatcatt gaactcaggaagacgatccatagagcatatgttctacgctctaactcaacatacctatct agagttggccactatgaccttcagcttgaaagctacacttgggcttcctcgcccattcgt cggtacgtggacattattgttcagaggctcctgcactcagttcttgaaaacaaagcagtc aggtacacgtctttggaaattgaccagtcctgtctgagtttttcgagaaaatctgaaaag caaaaaatgtatgagaggaaagctcattgcttgagttttgcatcgcagctgaacaatcaa agtgcacagaagatagcctttgtcattgatgcctccccagctggaaacagtttaacggtg tattttccgtttaatcgatcctcaatgccagaaaatatccttatcatgtatagggatctg cagttgacagaccaaccagagttcaatgaacataacaaccatgtggttctgaaatggaag agaagagtatactccttcacaaatgagaacatccacgctgaactgcaacaacagtcacct catccatttgtgacatcagtgccaacagacttgtggaaagggatgctgtcagctctgaag gaggagaacttggacatcgtgttccaatccctacagaccattagctcaagtgtcaatgat aaccaacaggtctgctcaggtctgctccaatatacaccaacgacggccagaaccaatcca aatccaggtcattacattgaattgccattgagggtaaagtctggtgaaacgctgaaggtg caactgggcactgacacacagcggggattattagtacctgtggttcagatgctggttgta tgtaacaagtttgagatttgcttggagcactcaaaagacccaactctgtgtttctccaag tatgcactccattcatcgaagaaaacatacaccacttaccaggagtatcagaagatatgg aaaccattgtgtgagatggagtcagcctccaacgctgtaacagaaaatgacagcattgtc cttgaagatgtgtctttgacatggaaacagatacagaaggagagtcaactcggtggattc ttccagttgtcacttgagaagatgaaacagtgggccattgagtatggtctcaaacacagc tttctgtgtatccgcatgaggtaccaaaatcgagtggatttgtcaaacaatggcgctgat gatgatcagcatgtggacctcagcaatatcccatctctcatttgggttgctcatggaata accactggggtcactgatgaggatgaagctaaaaacctctcctatgtccagatagacttc cggattaatcacatgtccattgccaagattccagagagggtcttcgggaaagatacaaga ttcacagtagaattaattccaaagctgttacctgatgtgcgtaaagaggctgccattgac aacctcactcaggctaacgaacttgtgaagaacatttctcttggcaagaggacaaactct gcacctgtaactaaagagctgagacctgccaggtttgatatcaaagttcattcctccaag tttcctgatctgaatatcagtcaaaccagagctattaaagaggccctcgacaaccgattc actctcattcaggggccaccaggcactgggaagacggtggttggagtccaccttgtttat tggttctttctgcaaaaccaaaaagacccaaaccacctaaggcctaaagctgttggtggg tcttcaaagaggaagtgcattctatattgcggaccctctaataaatcggtggacgttgta gctggtcaacttctgaaactccggaaggtgttgaagccacttcgtgtttacagtgagcag atggagatgttggagtttccctaccctggcagcaacctgaagctgtcacgcaggtcaatc agggaagagagacccaagagagagctcagttccatcacattgcatcatcttattcggatg cctgagaacccattctccaatgaaattatttattttgatgcaagaattcaaaggggagag gatctcacagacaaggagattgagagctacaaagtcctcctaagtcaagctcggaatcat gagttgatgaggcatgatgtcattctctgcacttgtactgcggcgtcaaatcccaacttc tacaagctggatttgaaacagattatcattgatgagtgtgccatggcaactgagcctgaa gccttcatcccccttgtgacccataaacctgaacagattgttttactcggcgatcacaag caattgcagcccatcacgcacagtgatctttcagcaaggttgggtatgaggaaatctctg tttgagcgttacatggaaaaggcgttgatgctggatacgcagtacagaatgcatgagcgc atttgtgagtttccttcaaaggagttctacaacggtattctcaagactggagcaactccg aaagacagtgtcctgctcgctcagtctcatcatctgacgcccatcctttttggacacgtt tccggaaaagagatcagtcttgtggtctccaccgaacgggggaatgagaactcaaaggcc aactcggcagaggctgaggaatcggttcgcatcgcctctctgttgatcaaacatgctggg gtggcggctagcgacatagctattctgacgccatacaatgcccaggtagccaaggtaaac gaaaccctgttaatgaagcatatccagaacgtcaacgtgaataccatcacaaagagtcaa ggaagtgaatggcgttatgtcatcttgtctactgtgcgctcttgtcccaagtcggaaatt gacacagagcctaccaaagcatggctcaccaagaagcttggttttgtcatggacccaaac caagtcaatgtgggcatcactcgggctcaggagggactgtgcattattggaaaccaagag ttgctgaggtgcagttcactgtggaagaggctgttggttcattaccagcaatgtggctgt gtggtggatcctgctaaagacattcaagttcaaaacccacacgtcaaaaccaaatcaaag tacaaaagagcctcaaagtttcaaaacagaaaatga

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