Salmo salar (Atlantic salmon): 100380743
Help
Entry
100380743 CDS
T04363
Symbol
scfd1
Name
(RefSeq) sec1 family domain containing 1
KO
K19998
sec1 family domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100380743 (scfd1)
Membrane trafficking [BR:
sasa04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
100380743 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100380743 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
100380743
NCBI-ProteinID:
XP_014049668
UniProt:
A0A1S3RBD1
LinkDB
All DBs
Position
ssa01:34630133..34648085
Genome browser
AA seq
634 aa
AA seq
DB search
MAASVREKQAAALKRMLNFNTSPLKNTAAEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
AGAALSANAVTQVTKVFDQYLNFITLEDDMFILCNQNKELISYHAINKPDIMDTEMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGAGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSMDESVGSEASPSGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISSISMSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKL
MSKSTLDKSLLDIISDPDAGTPEDKMRLFLIFYITALQPPSESDLDQYKKALLETGCDLS
SLNYIKQWKAFTKIAATPSNYGNSGVKPMGLFSRVMNSGSQFVMEGVKHLVLKQHNLPVT
RILDNLMEMKSNPETDDYRYFDPKMLRGSESSTPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYTKAKPGKRVLYGCSELFNAGQFIKQLSSLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtccgggaaaagcaggcagctgcattgaagcgcatgctgaatttcaac
acgtctccgttgaaaaacactgctgctgagccggtatggaaggtgctgatctacgacagg
ttcggccaggacataatctcccctctactggcggtcaaagaactacgggacatgggaatc
actttacacttgttgcttcattcagacagagatcccattccggatgtgccagccatctat
tttgttatgccgacagaggagaacattgaccggatatgccaagaccttcgtaaccagctg
tatgagtcatactatttgaacttcatctcagccatatccagaagtaaactggaggatatt
gctggtgcagctctctcagccaacgctgtcacacaggttaccaaggtgtttgatcagtat
ttgaatttcatcacactcgaagatgatatgttcatcctctgtaatcaaaataaagagctc
atctcctaccatgcgattaacaaaccggacatcatggacacagagatggaggccatcatg
gatacgatagtagacagccttttctgcttctttgtcactctgggtgctgtccccataatc
cgctgtccaagagggaatgctgcggagatggtcgcggtgaaacttgacaagaagctgagg
gagaacctgcgagacgccagaaacagcctgttcactggagacaatatgggggccggccag
ttcagcttccagagacccctatttgtacttgctgaccgcaacctggatcttgccaccccc
ctccaccacacatggacctaccaggccctcatccacgatgtgctggacttccacctgaac
agggtcagtatggacgagtctgtggggtcagaagcttccccttccggagccagacccaag
aagaaaaataagaagagttatgacctcacagccgcagacaaattctggcagaaacacaag
ggcagcccgttcccggaggtggctgagtctgtacaggaggagttagacacgtaccgagcc
caagaggacgaggtgaaacgcctcaagagcatcatggggttggagggtgaggatgagggt
gccattagtagtattagtatgtcagacaacaccgcaaaacttacctcagctgtcagctcc
ctaccagagcttctggagaagaagaggctgattgacctccacactaatgtagccaccgcc
gttctagatcacattaagagccgtaaactggacgtgtactttgagtacgaggagaagctg
atgagcaaatccaccctggataagtctttactggacatcatcagtgaccctgacgcggga
acaccagaggacaagatgagactgtttctgattttctacatcacagccctgcagccccct
tcagagagtgatctggaccaatacaagaaggctcttctagaaactggctgcgacctgtcc
tctctcaactacatcaagcagtggaaggctttcacaaagattgctgccacaccatctaac
tatgggaacagcggcgtgaaacctatgggcctcttctctagagtgatgaactctggctcc
cagtttgtcatggagggggtgaaacacctggtgcttaaacagcataacctgccagtcacg
cgtatcctggacaacctgatggagatgaagtccaatccggagactgatgactacagatac
tttgatcccaagatgctgcgcggcagtgagagctcaaccccaaggaacaagaacccgttt
caagaggctatcgtctttgtggtcggaggaggaaactacatagaatatcaaaacctggtg
gactacacaaaggcaaagccagggaagagggtgctgtacggatgcagtgagctcttcaat
gcagggcagttcatcaaacagctatcctcactcggccaaaaataa
DBGET
integrated database retrieval system