Salmo salar (Atlantic salmon): 100380773
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Entry
100380773 CDS
T04363
Symbol
sptan1, spta2
Name
(RefSeq) spectrin alpha, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04210
Apoptosis
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100380773 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100380773 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
100380773 (sptan1)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100380773 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
100380773 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
100380773
NCBI-ProteinID:
XP_013998412
UniProt:
A0A1S3M5F3
LinkDB
All DBs
Position
ssa01:complement(145439509..145493835)
Genome browser
AA seq
2487 aa
AA seq
DB search
MATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFKELSGVRRQKLEDSYRFQFFRRD
ADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISE
GHFASETIRTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAMA
TSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLSQESHPEVELIVRKQEE
VNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQA
LLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLAAE
RHARLNDSYRLQRYTSDFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDA
HEDSFKATDEAGQALLNTGHYASEEVKEKLGVLTEEKESLLELWEVRRQQYEQCMDLQLF
YRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATK
LIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFSRDSDELKSWINEK
MKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVSVR
MDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTS
VQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIKRKQEALVARYDALRDP
MAARKQKLSDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAE
IAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLEELNGRWDTLKGKAGQRRQDLEDSLQA
QQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQ
AQTCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDR
QGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQPLAKEACSVSVRMKQVEELY
GTLQELGEKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKF
DDFQKDLKANESRLRDINKVASELESEGLMAEEATMVQAQEQVMLGSAPGQDEGDNKNAS
PWKNVRLAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIE
EKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDI
QEKCTELNTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKD
VTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERADL
EKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDF
DKAINVQEEKIAALQSFADQLVGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGES
QTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADR
IRGVIDTGNALIHRGACSGSEDAVQSRLGALDEQWQFLVNKSAEKSQKLKEANKQQNFNT
GIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLT
ASTAFDPTQVKDKRDAVNGRFAKIKSMATGRRAKLNESHRLHQFFRDLDDEESWIKEKKL
LVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQDEIEQRL
AQFEEHWMELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAV
QGLLKKHEAFETDFSVHRDRVNDVCSNGDELIKKNNHHVDSISAKMASLRGKVSELERAA
AMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGL
QAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMKRWNQLLDNSQARKKKLLEAQEH
FRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSSAQA
DFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDK
LRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKI
EDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEDAL
KEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGN
VSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYVTKEELYQNLSKEQADYCISHM
KPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggagtctgct
gatgacatccaggagcgccggcagcaggtgttggatcgctaccggcgtttcaaggagctg
tcgggcgtgcgacggcagaagctggaggactcgtaccgcttccagttcttccgccgcgat
gctgacgagctggagaagtggatccaggagaagctgcagatcgcctctgatgagaactac
aaggaccctaccaacctccagggcaagctccagaaacatcaggccttcgaggcggaggtg
caggccaacgctggagccatcattaagctagacgagactggcaacctaatgatctccgaa
ggccactttgcctccgaaaccatccgcactcgtctggaggagcttcaccgtctttgggat
ctgctgctgcagaagaccaaggagaagggtgtccgtctgctgcaggcccagaagctggtg
cagtacctgcgcgagtgtgaggatgccctggactggatcagtgacaaggaggccatggcc
acctcggaggagctgggccaggacctggagcacgtagaggtgctccagaagaagtttgag
gagttccagacggacctggcagcccacgaggagcgtgtgaatgaggtgaaccagctggcg
ggcaagttgagccaggagtcccaccccgaggtggagctcattgttcgcaagcaggaggag
gtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcaggctgttc
ggagccgccgaggtgcagagatttaacagggatgtggacgagaccattagctggatcaag
gagaaggagcagctcatggcatccgatgactttggccgggacctggccagcgttcaggct
ctgctgcgcaagcatgagggcctggagagagacctggctgccctcgaggacaaggtcaac
actctgggcggagaggcagaacgtctgcagcagacccacccccagaacgcctcccagatc
cacctgaagagggatgagctcatcaccaactgggagcagatccgcacgctggccgccgag
cgccacgcccgcctcaacgactcctacaggctgcagcgctacacttcagacttccgtgac
ctgaccagctgggtgacggagatgaaggccctgatcaacgctgatgagctggccaacgac
gtggctggagctgaggctctcctcgaccgccaccaggaacacaagggtgagattgacgcc
catgaggacagcttcaaagccacggacgaggccggccaggctctgctcaacactggacac
tacgcctcagaggaggtcaaggagaagctgggtgtactgactgaggagaaggagtctctg
ctggagctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcagctcttc
tacagggacacggagcaggtcgacaactggatgagcaagcaagaggcgttccttctgaac
gaggatcttggtgactctctggacagcgtggaggccctgctgaagaaacacgaggacttt
gagaagtccctcagcgctcaggaggagaagatcactgccctggatgaatttgctaccaaa
ctgatccagaacaaccactacgccaaggaggatgtggccactcgtagagatgctctgctg
agccgccgtaacgccctgcatgagcgtgcccagtcccgccgcgccgccctggaggactcc
ttccacttgcagcagttctcccgcgactcggacgagctcaagagctggatcaatgagaag
atgaagactgccaccgacgaagcctacaaggatccgtccaacttgcagggcaaggtccag
aagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgacgcgctgcag
aagtctggacaggagcttctggacggcaagcactacgccgccgacgaagtgtcggtccgc
atggacgaggtcagctcccagtggaagaagctgctggaggccaccgagctcaaaggcatc
aagctgcgtgaggctaaccagcagcagcagttcaacaggaatgtggaggacattgagctg
tggctgtacgaggtggagggccacctggcctccgacgactacggcaaggacctgaccagc
gtccagaacctgcagaagaaacatgccctgctggaggccgatgtggccgcacaccaggac
cgtattgacggcatcaccatccaggcgcgtcagttccaggaggcgggccactttgacgct
gacaacatcaagcgcaagcaggaggcgctggtggcgcgctacgacgcccttcgcgacccc
atggctgcccgtaagcagaagctatcggactcgctgcggctgcagcagctcttcagggat
gtggaggacgaggagacctggatccgggagaaggagcccatcgccgcctccaccaaccgg
ggaaaagacttgattggcgttcagaacttgctgaagaagcaccaggccctgcaagcggag
atcgctggccacgaaccccgcatcaaggctgtcacccaaaagggagaggccatggtggag
gaaggtcactttgccggagaggaggtgaaggtgaagctggaggagctgaacggccgctgg
gacaccctgaagggcaaggccgggcagcgcaggcaggacctggaggattcgctgcaggcc
cagcagtactttgccgacgccaacgaggcagagtcctggatgagggagaaggagcccatt
gtgggcagccccgactacggcaaggacgaggactctgctgaggccctgctaaagaaacac
gaagccctgatgtctgacctgagtgcctatggaagcagcatccaggctctgaaggagcag
gcccaaacctgtcggcaacaagtggctcccaccgatgatgagacgggtaaagagctggtg
ctggccctctatgactaccaggagaagagcccccgcgaggtcaccatgaagaagggagac
atcctcaccctgctcaacagcactaacaaggactggtggaaggtggaggtgaacgaccgc
cagggttttgttccggcagcctacgtcaagaagttggatcccacccagtcctcttccaga
gagaacctgctggatgagcagggcagcatcggcctgcgccaggatcagatcgagaaccag
ccgttggccaaggaggcgtgcagtgtgtctgtacgcatgaagcaggtggaggaactgtac
ggaactctccaggagctgggcgagaagcgcaaggacatgctggagaagagctgcaagaag
ttcatgctgttccgcgaggccaacgaactgcagcagtggattaacgagaaggagggagcc
ctcaccaatgaggaggtgggctccgacctggagcaggtggaggtgctgcagaagaagttt
gatgacttccagaaggacctgaaggccaatgagtctcgtctgagggacatcaataaggtg
gcgtctgagctggagtctgagggcctgatggccgaggaggcaaccatggtgcaagctcag
gaacaagtgatgctgggatctgctcctggccaggatgagggtgataacaagaatgcctct
ccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatactatcaaggag
ctgaacaaccgctggagatccctgcagcagctggccgaggagaggagcaacatgctgggt
agtgcccacgaagtgcagaggttccacagggatgcagatgagaccaaggagtggatcgag
gagaagaaccaggcgctgaacacagacaactatggccacgacctggccagcgttcaggcc
cttcagcgcaaacacgagggctttgagagagacctggccgccctgggagataaggtgaac
tccctgggggagacagcggagcgtctgatccagtcccacccggaggcggtggacgacatc
caggagaagtgcacagagctcaatacggcctggagcagcctggtggggcgcgctgaccag
cgaaaggataagctaggcaactcccacgacctgcagcgcttcctctccgacttcagggac
ctcatgtcctggatcaacggcatccgaggcctggtgtcctcagaagagctggccaaggac
gtgaccggggctgaggccctgctagagagacaccaggagcaccgtactgagatcgacgcc
cgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggcgcgcggccac
tacgccagccctgagatccagcagaagctggaggccttggaccacgagagggcagacctg
gagaaggcctgggtgcagagacgaatgatgctcgaccagtgcctagagctccagctgttc
aaccgtgactgtgaacaggctgagaactggatggcggctcgcgaggccttcctggccagc
gacgacaagggtgactccctggacagcgtggaggctctcatcaagaaacatgaggacttt
gacaaggccatcaacgtgcaggaggagaagatcgctgctctgcagtcctttgcagaccag
ctggttggcgctgatcattatgccaaaccagagatattcaaccgtcgcaatgaagtcctg
gacaggtggcgccgtctgaaggctcagatgattgagaagcgctccaagctgggcgagtcc
cagacgctgcagcagttcagccgcgacgtggacgagatagaggcctggatcagcgagaag
ctgcagacagctacagacgagtcctataaggaccccaccaacatccagctgtcgaagctg
ctgagtaagcaccagaagcaccaggccttcgaggcggagttgcatgccaacgcagaccgc
atccgtggggttatcgacactggcaacgccctcatccatagaggggcctgctccggcagt
gaggatgcggttcagtcgcgtctgggtgccctggacgagcagtggcagttcctggtgaac
aagtcggcagagaagagccagaagctgaaagaagccaacaagcagcagaacttcaacact
ggcatcaaggactttgacttctggctctctgaggtcgaggcccttcttgcctctgaggat
tatggcaaagacctggcctcagtcaacaacctgctgaagaaacaccagcttctggaagcc
gacatctctgctcatgaggatcgtctgaaggacctgaacggccaggctgacagcctgacg
gccagcacggccttcgaccccacccaggttaaggacaagcgtgacgccgtcaatggacgc
ttcgccaagatcaagagcatggccactggccgccgtgcaaagctcaacgagtcgcaccgc
ctgcaccagttcttcagggacctggacgacgaggagtcttggatcaaagaaaagaaattg
ctagtgagttcggaggactatggacgtgatttgacaggagtgcagaatctgaggaagaaa
cacaagaggctggaagctgagttgggggcccatgagccggccatccagtctgtgcaggac
acagggaagaagctgtccgatgacaacaccatcggccaggatgagattgagcagaggctg
gcccagtttgaggagcactggatggagctgaaggacctggctgcagccaggggacagagg
ctggaggagtcgctggagtaccagcagtttgttgcgaatgttgaagaggaggaagcctgg
attaacgagaagctgaacctggtgggaagtgaagactacggggataccctggctgctgtg
cagggcctgttgaagaagcatgaggcgtttgagactgacttctccgtgcacagggacaga
gtgaatgacgtgtgttccaacggagacgagctcatcaagaagaacaaccaccacgtggac
agcatctcagccaagatggcgtccctgcggggcaaggtgtctgagctggagagggccgct
gccatgagaaaagccaagctggatgagaactctgccttcttgcagttcaactggaaggct
gacgtggtggagtcctggatcggtgagaaggagaacagcctgaagactgatgactacgga
cgagatctctcctctgtgcagacgttgctcactaagcaggagacgtttgacgcagggctg
caagccttccagcaggagggtatcaccaacatcacggccctcaaggaccagctgctggcg
gccaagcacgtccagtccaaggccatcgaggcgcgccacgctgccctcatgaagcgctgg
aaccagcttctcgacaactcgcaggcccgcaagaagaaactgctggaggcccaggaacac
ttcaggaaggtggaagacctgttcctgacctttgccaagaaggcatcggccttcaacagc
tggtttgagaacgctgaggaggacttgacagatccggtgcgctgcaactcgctggaggag
atccgggcgctacgcgacgcccacgaggccttccgctcatcgctgagctcggcgcaggcc
gacttcaaccagctggccgagctggaccggcagatcaagagctaccaggtggtgtccaac
ccttacacctggttcaccatggaggccctggaagagacctggaggaacctgcagaagatc
atcaaggaacgagagctggagctgcagaaggagcagaggaggcaggaggagaacgacaag
ctgcggcaggagtttgcgcagcacgccaatgcattccaccagtggctgcaggagaccagg
acatatcttctggatgggtcctgcatggtagaagagtccggaaccttggaatcacaactt
gaggcaaccaagcgcaagcaccaggagatccgggcaatgcgtagccagctgaagaagatt
gaggacctgggtgcggccatggaggaggctctgatcctggacaacaagtacacagaacac
agcacggtgggcctggcccagcagtgggaccagctagaccaactgggcatgaggatgcag
cacaacctagagcagcagatccaggccaggaacaccactggagtgacagaggatgccctg
aaggagttcagcatgatgttcaagcactttgacaaagagaagtctggccgtctgaaccac
caggagttcaagtcgtgtctgcgctcactgggttacgacctgcccatggtggaggaggga
gagccagaccccgagtttgagtccatcctcgacactgtcgaccccaacagggatggcaat
gtgtccttgcaggagtacatggccttcatgatcagccgcgagacagagaatgtcaagtcc
agcgaggagattgagagcgccttccgagccctcagcgtcgatgccaagccctacgttacc
aaggaggagctctaccagaatctgtccaaggaacaggcagactactgcatctcgcacatg
aagccctacttagacagcaagggccgggaaatgccctcggccttcgactttgtcgaattc
acccgctcgctttttgtcaactga
DBGET
integrated database retrieval system
