KEGG   Salmo salar (Atlantic salmon): 100380812
Entry
100380812         CDS       T04363                                 
Symbol
hnrl1
Name
(RefSeq) Heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    100380812 (hnrl1)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    100380812 (hnrl1)
Spliceosome [BR:sasa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    100380812 (hnrl1)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     100380812 (hnrl1)
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 AAA_18 KTI12 Zeta_toxin
Other DBs
NCBI-GeneID: 100380812
NCBI-ProteinID: NP_001167405
UniProt: C0HA39
LinkDB
Position
ssa11:77537105..77546626
AA seq 899 aa
MSGINVKKLKVNELKEELQQRGLDTRGLKADLVIRLQSALEAEAAGEEGGPPTADAGGDE
EHDIGADGDDYSDEVKDDGEEDQDGEDDEVHFVPQAKEEKFNEEKGDGEQSEDEQEEDSR
DGAQEDSREGAQVLEPERAEPEMEEPEPPQPEPVQPEPPQPEAMKPEPVQPKPVEPASIE
PEAKHVEMSEIKPDEFVMKAELKKEADEPQQQEQLKKEPKQPEEHLPDAANECEAMEAEQ
VSQAKTEDDRCNRKRPYDEGRGYGYYEHREERRARSPQPPAEEEEEDFDDTLVAIDTYNC
DLHFKVSRDRYSGYPLTIEGFAYLWSGARASYGVNKGQVCFEMKINEEISVKHLPSSEPD
PHVVRIGWSLDTCNTQLGEEQFSYGYGGTGKKSSNCKFEDYGEKFCENDVLGCYIDFDSG
DEVEMAFSKNGKWLDVAFRVSREELAKQPLFPHVLVKNCAIEFNFGQKEEPFFPLPEGYT
FIQNVPLENRIRGTVGPATKADCELLMMVGLPASGKTTWASKHATEHPAKKYNILGTNAI
MEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKM
RPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANFVLPEAGEFLDNVT
FIELQKEEADTLVKQYNEEGRKAGPPPDKRFDNRQGGFRGRDAPYQRYDNRGGSQGGRGG
YQSRGGPQGGNFRGGYNRGGYQQNRWGGNRDGAAGGQHGYNRNQQSGGSYNQHRQGQYNK
GATGSYSQGQPQTYNQGYNQGYNQGNYNQGYNYGNYSQYPGYSQSYSQTPAAPAAAAAAP
AATGQTYSQQQQNYNQQYQQYAQQWQQYYQNQSQWNQYYSQYGNYGNYSQGSQGSQGTQ
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagtggaatcaatgtgaagaagctcaaagtcaacgagctgaaagaggaacttcagcag
cgaggcctggatactcgtgggctgaaggcggatcttgtcataaggttgcaatcagcactt
gaggccgaggctgcaggtgaagagggcgggccaccgactgctgatgctgggggggatgag
gaacacgatattggcgcagatggcgacgactactcagatgaagttaaagatgatggggaa
gaagaccaagatggcgaggacgatgaagtacactttgtcccgcaggctaaagaagaaaag
tttaatgaggagaaaggtgatggtgaacagagtgaagatgagcaggaagaagacagccgg
gatggggcacaggaagacagccgagaaggggcacaggtgttagaaccagagagagcagaa
ccagagatggaggaaccagagccaccacaaccagaacctgtgcagccagagccaccacaa
ccagaggctatgaaacctgaaccggtgcaaccaaagccagtggaaccagcatcaattgag
cctgaagcaaagcatgtggagatgtctgaaattaagccagatgagtttgtgatgaaagca
gagttgaaaaaagaggcagatgaacctcagcagcaggagcagttgaagaaggagccaaag
cagccagaggaacatcttccagatgctgccaatgaatgcgaggccatggaggctgagcag
gtgagccaagccaaaacggaggatgaccgatgcaaccgtaagaggccatacgatgaaggc
cgtggctatggctattatgaacaccgagaggaaagaagggcacgttctccacagccccca
gcagaggaagaggaagaagattttgatgacactcttgtggctattgatacgtataattgc
gatctgcacttcaaggtatcacgtgaccggtatagtggatacccgctcaccatcgaaggt
tttgcatacctgtggtcaggtgcacgagcttcctatggcgtcaacaaagggcaagtctgc
tttgaaatgaagataaacgaggagatctctgtgaagcaccttcccagcagtgagcctgat
ccacatgtagtgcgcattggctggtccttggatacctgcaacacccagctcggtgaagaa
caattctcttatggctatggaggaactggcaagaaatcttcaaattgtaaatttgaggat
tacggggaaaagttttgtgaaaatgatgtccttggatgctacattgacttcgatagtggt
gatgaagtggagatggcgttctcaaagaacggcaagtggctggatgtggccttccgtgtg
tcacgggaggagttagctaaacagccactctttccccacgttcttgtgaagaactgtgca
attgaatttaactttggccagaaagaggaacccttcttccccctgcccgagggatacacc
ttcattcaaaacgtccctctggaaaacaggatacggggaacagttgggcctgcaaccaag
gctgactgtgagctcttgatgatggttggcctgcctgcatctgggaaaaccacctgggcc
tcaaagcacgcgacagagcaccctgcaaagaaatacaacatcctgggcaccaatgccata
atggagaagatgaaggtgatgggactgcgtcgtcagaagaactatgctggtcgctgggat
gtcctgatccagcaggccacacagtgtctgaacaggttgatccagatcgctgcccgcaag
aagcgtaactacatcctggatcagacaaatgtatatggatcagcccagagacgaaaaatg
cgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacggacgaggattta
aaagagcgaacgttaaagcgaactgatgaggaagggaaggatgtgcccgatcatgccgta
ttagaaatgaaagccaactttgtgctcccagaagctggtgagtttcttgacaacgtgacc
ttcatcgagcttcaaaaagaagaggctgacacgctggtgaagcagtacaacgaggagggc
cgcaaggccggcccaccccctgacaaacgcttcgacaaccgccaaggaggtttccgtggt
cgcgatgcaccttatcagcgctatgacaaccgtggtggctctcaaggaggaaggggaggt
taccagagtcgtggtggaccccaaggtggcaacttcagaggaggctataaccgtggaggc
taccagcagaaccgttggggaggcaaccgtgatggcgcagcaggagggcaacatggctac
aaccgcaaccaacaatctggagggagctacaatcaacaccgccaaggacaatataacaag
ggagccactggcagttacagccaaggacagccacagacatacaatcagggctacaatcaa
ggctacaatcaaggcaactacaaccagggttacaactacggcaactacagccagtaccca
ggttacagccagagctatagccaaactcctgctgctcctgccgctgctgctgctgctcct
gccgccactggacagacctacagccagcagcagcagaactacaaccagcagtatcaacag
tatgcacagcagtggcagcagtattaccagaaccagagccaatggaatcagtactacagc
caatacggcaactatggcaactacagccagggttctcagggctcccagggcacgcagtag

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