Salmo salar (Atlantic salmon): 100380812
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Entry
100380812 CDS
T04363
Symbol
hnrl1
Name
(RefSeq) Heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100380812 (hnrl1)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100380812 (hnrl1)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
100380812 (hnrl1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100380812 (hnrl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
AAA_18
KTI12
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100380812
NCBI-ProteinID:
NP_001167405
UniProt:
C0HA39
LinkDB
All DBs
Position
ssa11:77537105..77546626
Genome browser
AA seq
899 aa
AA seq
DB search
MSGINVKKLKVNELKEELQQRGLDTRGLKADLVIRLQSALEAEAAGEEGGPPTADAGGDE
EHDIGADGDDYSDEVKDDGEEDQDGEDDEVHFVPQAKEEKFNEEKGDGEQSEDEQEEDSR
DGAQEDSREGAQVLEPERAEPEMEEPEPPQPEPVQPEPPQPEAMKPEPVQPKPVEPASIE
PEAKHVEMSEIKPDEFVMKAELKKEADEPQQQEQLKKEPKQPEEHLPDAANECEAMEAEQ
VSQAKTEDDRCNRKRPYDEGRGYGYYEHREERRARSPQPPAEEEEEDFDDTLVAIDTYNC
DLHFKVSRDRYSGYPLTIEGFAYLWSGARASYGVNKGQVCFEMKINEEISVKHLPSSEPD
PHVVRIGWSLDTCNTQLGEEQFSYGYGGTGKKSSNCKFEDYGEKFCENDVLGCYIDFDSG
DEVEMAFSKNGKWLDVAFRVSREELAKQPLFPHVLVKNCAIEFNFGQKEEPFFPLPEGYT
FIQNVPLENRIRGTVGPATKADCELLMMVGLPASGKTTWASKHATEHPAKKYNILGTNAI
MEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKM
RPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANFVLPEAGEFLDNVT
FIELQKEEADTLVKQYNEEGRKAGPPPDKRFDNRQGGFRGRDAPYQRYDNRGGSQGGRGG
YQSRGGPQGGNFRGGYNRGGYQQNRWGGNRDGAAGGQHGYNRNQQSGGSYNQHRQGQYNK
GATGSYSQGQPQTYNQGYNQGYNQGNYNQGYNYGNYSQYPGYSQSYSQTPAAPAAAAAAP
AATGQTYSQQQQNYNQQYQQYAQQWQQYYQNQSQWNQYYSQYGNYGNYSQGSQGSQGTQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatcaatgtgaagaagctcaaagtcaacgagctgaaagaggaacttcagcag
cgaggcctggatactcgtgggctgaaggcggatcttgtcataaggttgcaatcagcactt
gaggccgaggctgcaggtgaagagggcgggccaccgactgctgatgctgggggggatgag
gaacacgatattggcgcagatggcgacgactactcagatgaagttaaagatgatggggaa
gaagaccaagatggcgaggacgatgaagtacactttgtcccgcaggctaaagaagaaaag
tttaatgaggagaaaggtgatggtgaacagagtgaagatgagcaggaagaagacagccgg
gatggggcacaggaagacagccgagaaggggcacaggtgttagaaccagagagagcagaa
ccagagatggaggaaccagagccaccacaaccagaacctgtgcagccagagccaccacaa
ccagaggctatgaaacctgaaccggtgcaaccaaagccagtggaaccagcatcaattgag
cctgaagcaaagcatgtggagatgtctgaaattaagccagatgagtttgtgatgaaagca
gagttgaaaaaagaggcagatgaacctcagcagcaggagcagttgaagaaggagccaaag
cagccagaggaacatcttccagatgctgccaatgaatgcgaggccatggaggctgagcag
gtgagccaagccaaaacggaggatgaccgatgcaaccgtaagaggccatacgatgaaggc
cgtggctatggctattatgaacaccgagaggaaagaagggcacgttctccacagccccca
gcagaggaagaggaagaagattttgatgacactcttgtggctattgatacgtataattgc
gatctgcacttcaaggtatcacgtgaccggtatagtggatacccgctcaccatcgaaggt
tttgcatacctgtggtcaggtgcacgagcttcctatggcgtcaacaaagggcaagtctgc
tttgaaatgaagataaacgaggagatctctgtgaagcaccttcccagcagtgagcctgat
ccacatgtagtgcgcattggctggtccttggatacctgcaacacccagctcggtgaagaa
caattctcttatggctatggaggaactggcaagaaatcttcaaattgtaaatttgaggat
tacggggaaaagttttgtgaaaatgatgtccttggatgctacattgacttcgatagtggt
gatgaagtggagatggcgttctcaaagaacggcaagtggctggatgtggccttccgtgtg
tcacgggaggagttagctaaacagccactctttccccacgttcttgtgaagaactgtgca
attgaatttaactttggccagaaagaggaacccttcttccccctgcccgagggatacacc
ttcattcaaaacgtccctctggaaaacaggatacggggaacagttgggcctgcaaccaag
gctgactgtgagctcttgatgatggttggcctgcctgcatctgggaaaaccacctgggcc
tcaaagcacgcgacagagcaccctgcaaagaaatacaacatcctgggcaccaatgccata
atggagaagatgaaggtgatgggactgcgtcgtcagaagaactatgctggtcgctgggat
gtcctgatccagcaggccacacagtgtctgaacaggttgatccagatcgctgcccgcaag
aagcgtaactacatcctggatcagacaaatgtatatggatcagcccagagacgaaaaatg
cgtccttttgaaggttttcaacgcaaggctattgtaatttgtcccacggacgaggattta
aaagagcgaacgttaaagcgaactgatgaggaagggaaggatgtgcccgatcatgccgta
ttagaaatgaaagccaactttgtgctcccagaagctggtgagtttcttgacaacgtgacc
ttcatcgagcttcaaaaagaagaggctgacacgctggtgaagcagtacaacgaggagggc
cgcaaggccggcccaccccctgacaaacgcttcgacaaccgccaaggaggtttccgtggt
cgcgatgcaccttatcagcgctatgacaaccgtggtggctctcaaggaggaaggggaggt
taccagagtcgtggtggaccccaaggtggcaacttcagaggaggctataaccgtggaggc
taccagcagaaccgttggggaggcaaccgtgatggcgcagcaggagggcaacatggctac
aaccgcaaccaacaatctggagggagctacaatcaacaccgccaaggacaatataacaag
ggagccactggcagttacagccaaggacagccacagacatacaatcagggctacaatcaa
ggctacaatcaaggcaactacaaccagggttacaactacggcaactacagccagtaccca
ggttacagccagagctatagccaaactcctgctgctcctgccgctgctgctgctgctcct
gccgccactggacagacctacagccagcagcagcagaactacaaccagcagtatcaacag
tatgcacagcagtggcagcagtattaccagaaccagagccaatggaatcagtactacagc
caatacggcaactatggcaactacagccagggttctcagggctcccagggcacgcagtag
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