Salmo salar (Atlantic salmon): 100380813
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Entry
100380813 CDS
T04363
Symbol
t2fb
Name
(RefSeq) Transcription initiation factor IIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100380813 (t2fb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100380813 (t2fb)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100380813 (t2fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
100380813
NCBI-ProteinID:
NP_001167406
UniProt:
C0HA63
LinkDB
All DBs
Position
ssa16:81247909..81257974
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AA seq
257 aa
AA seq
DB search
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIGKNQGKAEVAFTLNE
DLTMIDSLGDKPSGVQAPRDHPFTMQTVGGQTLAVFTETQSESSKERISLEGLVVQRAEC
RPAVSESYMKLKRLQIEELSKPLRLSQQLEKAVTTNYKPVANHSYNLEYDRKKKDEGKRA
RADKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVSYLKEILRDIGIYNVKGTHKNTWELK
PEYRHYQGGEEEKETDD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaggcgaagtggacttaactggtgctaaacagaacacgggcgtgtggctg
gtaaaggtgcccaaatacctgtcacagcaatgggccaaagcatcaggaagaggagaggtg
gggaagctccggatcggcaagaaccaagggaaagcagaggtggcattcactctgaacgaa
gacctgaccatgattgacagcctcggggacaagccatcgggggtgcaggcccccagggac
cacccgttcaccatgcagactgtaggaggacagaccctggccgtgttcactgagacccag
tcagagtcatctaaggagagaatctccctggagggcctggtggtgcagagagctgagtgt
agacctgctgtcagcgaaagctacatgaaactcaagagactgcagatagaagagttatcc
aagccattgagattgtctcagcaactagaaaaggctgttaccaccaactacaaaccagtg
gccaatcattcctacaacctggagtatgacaggaagaagaaggacgaaggtaaaagagcg
agggccgataagcagcaggtgttggacatgttgttctcggcttttgagaaacaccaatat
tacaacatcaaggacctggtggacatcaccaaacaacctgtgagttacctgaaagagatt
ctgcgtgacatcggcatctacaacgtgaagggaacccacaagaacacctgggagctcaag
ccagagtacagacattaccagggaggagaggaggagaaggagaccgacgactag
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