Salmo salar (Atlantic salmon): 100380828
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Entry
100380828 CDS
T04363
Symbol
irx1
Name
(RefSeq) iroquois homeobox 1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100380828 (irx1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100380828 (irx1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
100380828
NCBI-ProteinID:
NP_001167421
UniProt:
C0HAT6
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Position
ssa14:70855773..70859726
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AA seq
457 aa
AA seq
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MSFSQLGYSQFLSGSQEVYGGDRAGLGRDGGADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDVSDSGSLESQRTMSVKALRSMEGPISLIKAPVGACKNAVDLSPNAPGCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIPHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPAGHHMPLHGPLNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctaagtggctcccaggaggtttacggg
ggcgaccgggccggcttaggccgggatggaggcgcggatggcggcgtgaatcaggcagct
actgccgctgcagttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccgtacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggagcaccagaagaacccgtat
cccaccaagggagaaaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tccacgtggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacatgggagcgaggatgaagaggaggaggagatcgatttagaaagtatcgacatcgat
aaagtcgaagaaaacccaggagatcagagggaagtggagggagaggggaagctggccgcc
agggacgtatcggattctggtagcttggagagccagaggacgatgtctgtcaaggccctc
agaagtatggaggggcctatttctctcattaaggctcctgttggtgcttgtaaaaacgct
gtggatctttcccccaatgcaccggggtgccagaggcccccacagaacaaacccaaaatc
tggtctctggcggagacggccacaagccccgacagttccatcaaaccttccccggctgtc
tcgattcctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaatgcggcgttcctcagc
gccaactctctgctgggtgtcaggtcacttctcggcgcggcaaacccagccggacaccac
atgcctctccatggcccgctgaaccatcaggacgcacggttgacgcaggcctcaggggca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccacggaacggcgcagcgggccctctcgacaatttccacaatatga
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