Salmo salar (Atlantic salmon): 100380864
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Entry
100380864 CDS
T04363
Symbol
sam68
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100380864 (sam68)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100380864 (sam68)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
KH_NusA_1st
STAR_dimer
Motif
Other DBs
NCBI-GeneID:
100380864
NCBI-ProteinID:
XP_014066004
UniProt:
A0A1S3SNT4
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Position
ssa09:18892789..18900129
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AA seq
394 aa
AA seq
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MSSDAKPEPKKAKMENESKYLPELLAEKDSLDSSFTHAMKLISTEIERIQKGETKKETER
ETYLDLFTTKNIKVKERVLIPVKQYPRFNFVGKILGPQGNTIKRLQEETGAKISVLGKGS
MRDKVKEEELRKGGEPKYAHLGMELHVFIEVFAPIPEAYLRMAHAMDEVKKFLIPQDTMD
GICQDQFMEIGYLNGGQDSQSRGRGGPPGRGRGAPPPNSVGARGRGMPPRGGAPRGGTQR
GGASRGGPPRGGSARGAPAGRGGPPSTPARGGTTPRSRPPTPGTPRMLPSPAHSHQQHQH
QHAPPPKAEAYNEYPAYEESYAEPAYEGYDNYYSQQPPQADTEYYDYGHGEAQEAYEPYA
QDDWEGSWSSTGGKAPPARQDKRGAYREHPYGRY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgacgctaagcccgagcctaaaaaagccaaaatggagaatgaaagcaagtat
ctccctgagcttctggcagaaaaagacagtctggattcttcattcacacatgcaatgaaa
cttatatcaacagagatagaaaggattcagaaaggagagacaaagaaagagacagaaaga
gaaacttacctggacctgtttaccacaaagaacatcaaggtcaaggaacgtgtactcatt
cccgtcaaacagtacccaaggttcaactttgttggtaagattttgggaccccaggggaac
acaatcaagcgcctccaggaggaaactggagcaaagatctcagtgttgggcaaaggttcc
atgagggacaaggtgaaggaggaagagctgagaaagggtggtgagcccaaatatgctcat
ctgggcatggaactgcatgtcttcatagaggtgtttgctcctatacctgaggcatacctg
cgcatggctcacgccatggacgaggtcaagaagttcctcatccctcaggacaccatggat
ggtatatgccaggatcagttcatggagattggctacctgaatggcggtcaagattcacaa
tccaggggacgagggggccctccaggcaggggcaggggagcacccccacccaactcagta
ggagccagggggcgaggaatgccacctcgtgggggagcccctcgtggaggcacccaacgt
ggtggagcttcccgaggaggacctcccaggggtgggtcggccagaggggctccagctggt
cggggtggacccccctctacacctgctaggggaggcacaacaccccgttccagaccaccc
accccagggacaccaaggatgctcccgtccccagcccactcccaccagcagcaccagcac
caacatgcaccaccacccaaggctgaggcttacaatgaatatcctgcctatgaagaaagc
tacgctgagcctgcatatgaaggttatgacaactattacagtcaacaacctccacaagcg
gacacggagtactatgactacggacatggagaggctcaggaggcttatgaaccctatgcc
caggacgattgggagggttcctggtcctccactggaggcaaagcccctccagcaaggcag
gataagaggggtgcctacagagagcatccatacggaagatactga
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