Salmo salar (Atlantic salmon): 100380865
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Entry
100380865 CDS
T04363
Symbol
syk
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100380865 (syk)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sasa01007
]
100380865 (syk)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
100380865 (syk)
Enzymes [BR:
sasa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
100380865 (syk)
Amino acid related enzymes [BR:
sasa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100380865 (syk)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100380865 (syk)
Prokaryotic type
Other AARSs
100380865 (syk)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
100380865
NCBI-ProteinID:
XP_013982133
UniProt:
A0A1S3KTW4
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All DBs
Position
ssa11:18873078..18884412
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AA seq
610 aa
AA seq
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MLTLVVRTARHQVCQAFGVRAQGVKFALPSTVSVPALIQGNRWRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKETNDQAVQNAYGADEETLDPNQYFKIRTQAIQALKGTAEDPYPHKY
NVDLSLTDFIEKYNHLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMAT
NRSYKSEGEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDELGFLEIETPMMNLIPGGAV
AKPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGGYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHD
LEKEMGVKFPAADTYDSDETRKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDESMSVDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFPAMKPDDNK
TAPLTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcaggactgccaggcaccaggtgtgtcaagcctttggggtcagg
gctcagggggtaaagttcgctctccccagcacagtgtcagtcccagctctaattcagggg
aatcgctggcgaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaaggagaccaatgaccaggca
gttcagaatgcatacggggcagatgaggagaccctggaccctaaccaatactttaagatc
cgcactcaagccatccaggctctgaagggcacagcagaggacccataccctcacaagtac
aatgtagatctgtcgctcacagatttcattgagaaatacaaccacctacagcctggagac
cagctaacagacattgtcctcaatgtatcaggtcgtgtccatgccaagagagagtccggg
gccaagttaatcttctatgacttgcgaggggaaggcgtcaagctgcaagttatggcaacc
aacaggagctacaagtctgaaggggagtttgtgcgcatcaacaacaagctgcggcgtggt
gacatcattggtgttcgtggtaacccagggaagaccaaaaagggcgagctgagcatcatt
cccatagagatgaccctgctttcaccttgcttgcacatgctgccccacctgcactttggt
ctcaaggacaaggaaacacgattccgccagcgatacctggatctgattctcaatgactat
gtgaggcagaagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctggat
gagctgggattcctggagattgagacgcccatgatgaacctgattcctggtggggccgtg
gccaaaccctttgtgacctaccataacgacctagacatgaacctttacatgaggatcgct
cctgagctctaccacaagatgcttgtggttggggggattgacagagtgtatgagattgga
cggcagttcagaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaa
ttctatatggcctatgcagattaccatgacttgatggatatcacagagaagcttctctcg
gggatggtcaagcacatcactggagggtacaaagtgaagtatcatccagagggtccagag
ggcccgacctatgagatcgacttcactcctcccttcaggagggtcagcatgacacacgac
ctggagaaggagatgggcgtcaagttcccagctgctgacacctacgacagtgacgagacc
cgtaaattctttgatgaactgtgtgcccagaaaggagtggagtgccctcctcctagaacc
actgcccgcctccttgacaagttggtgggagacttcctggaagtcacgtgtatcaacccc
acgttcatctgtgaccacccacagatcatgagccccctggccaagtggcaccggtcagag
aaaggcctgacggagcgttttgagctgtttgtattgaagaaggagatctgtaatgcctac
actgagttgaacgaccctatcagacagagggagctctttgagcaacaggctaaggccaag
gcagagggtgatgacgagagcatgtccgttgatgagactttctgcacggcactagagtat
ggcctgccaccaactgctggctggggcatgggcattgaccgccttaccatgttcctcaca
gactccaacaacatcaaggaggtgctgttcttccctgccatgaagcctgatgacaacaag
acagcccctctcacagagggcacctctgtgtag
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