Salmo salar (Atlantic salmon): 100380867
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Entry
100380867 CDS
T04363
Symbol
if4b
Name
(RefSeq) eukaryotic translation initiation factor 4B
KO
K03258
translation initiation factor 4B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100380867 (if4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100380867 (if4b)
03012 Translation factors [BR:
sasa03012
]
100380867 (if4b)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100380867 (if4b)
mRNA cycle factors
Stress granule specific factors
100380867 (if4b)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Initiation factors
eIF-4
100380867 (if4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
100380867
NCBI-ProteinID:
XP_014023451
UniProt:
A0A1S3P785
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Position
ssa22:47148644..47193014
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AA seq
664 aa
AA seq
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MAAPAKKKGNKKGKTLTLTDFLAEDNGSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HSGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIMDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMGGPDKTDSDDWRARPTADADDGPPKREESTFGSRDRYGD
RDGLRRDNDRGFGGDRDRGFGGDRDRGFGGDRDRGFGGDRDGGRDRGFGGRDRYDDRGGE
SGAFGSRRDRDDGGRRAFGSGYRRDDDGGGGGRYGERDRYGADREDRYERREERGGEGGP
TQRPKLVLKPRSTPKEEEQARSGGAGAAPAAPATAPSSGRASIFGAAKPVDTAAKEREVE
EKLQRQLEEDKSRGFDRKPRDRDRDPSWRSEEPPSERPATRSRTGSESSQTGSTSGGRVS
RRRESERSVENEVFSGKEDDPPSPGARPTSANSSTSSSKEPLKVMPAPPPKENAWAKRPA
VSAGSTPVSPSDAACPKLSSSSADERGSGRDENKVDGVRRDRGPPRGRGGAAGPGAGRGR
GEGANRDRRREEDRKDNRRDRDSRPAPEPKKYEESPTPKFSSASKYAALLMDSEQGDDAE
DSVE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctaagaagaaggggaataagaaggggaagaccctgaccctcactgac
ttcctggcagaggacaatgggagtggaggcaatgctccaccaccgcaacccagctacgcc
aagtccaccagctgggccgacgagacggatgacctggagggagatgtgtccacctcctgg
cactcaggggaggacagttaccgggccccggccatagatcgcaacatcctgcccacggcg
ccacggtcggcccgcgagcccaatgtggaccggtcacgcctcccccgcagccccccctac
accgccttcctgggcaacctgccctacgacgtctccgaggaatctatcatggacttcttc
cggggcctagcgatcagtgctgtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgcagagtttgatgatgtggactccctcctgagggcgctgactctc
aatgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaacgac
aaggaggggagagataatggccagatgggtggacgggacaggatgggccgtatgggagac
atggggggccccgacaagacagacagtgacgactggagggcccggcccactgctgacgct
gatgacggacccccaaagagagaggaatccactttcgggtcacgcgaccgctatggagac
cgtgacgggctgagacgggacaacgaccgcggatttggcggcgaccgggaccgcggattt
ggcggcgaccgggaccgcggatttggcggcgaccgggaccgcggatttggcggcgaccgg
gacggcgggagagaccgcgggttcggtggcagagaccgctatgatgaccggggaggtgag
agcggagcctttggctcccgcagggaccgggatgatggcgggcgacgtgcctttggcagt
ggctaccgccgtgatgatgacgggggtggtggtggccgctacggggaacgggatcgctac
ggcgcggacagagaggaccgatatgagaggcgcgaggagagaggaggtgagggtggtccc
acgcagagacccaagctggtcctgaagccacgcagcacgcccaaggaggaggagcaggcc
cgcagcggtggtgcgggagctgccccagctgctccagcgactgcccccagctccggccgt
gcctccatcttcggagcagccaagcccgtggacactgcagccaaggagcgggaggtggag
gagaaactccagaggcagctggaagaggacaagtccaggggctttgataggaaaccccgc
gatagagacagggacccaagttggaggagtgaggagccaccttctgagcgacctgctaca
cgctcccgcacaggaagtgagtcatcacagacgggaagtacatctggaggaagagtctcg
cggcgcagagagagcgagcgatcggttgagaatgaagtattcagtggtaaggaggatgac
cctccctctcccggagctcgccctacttccgccaactcttccacatcttcctccaaggag
cccctcaaggtgatgcccgcaccaccacccaaggagaatgcctgggccaagcgccctgcg
gtgagcgcagggtccacccctgtctcccccagtgacgcggcatgtcccaaactgagctca
agttctgcagatgaaagaggatctggaagggacgagaataaagtggacggtgtgcgtcgg
gaccggggccccccacgggggagagggggggctgcggggcctggagcagggcggggccga
ggagaaggggccaacagagatcgacgaagggaggaagacagaaaggataacagaagagac
cgggactcaagaccagcaccagagccaaagaaatacgaagagtccccaactcccaaattc
agctcagccagtaaatacgccgctttgctaatggacagcgagcaaggagacgacgcagag
gacagcgtagaataa
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